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GT20427

CSHL Arabidopsis genetrap mutant lines

Original: GT20427

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20427

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3106967 [Map]; Strand: c
      • AT3G10070.1 - [+] show detail - TBP-associated factor 12
        Distance: -152; Region: promoter
    Flanking Genome Sequence: GT20427 - 5-prime edge 
    ACTTGCTATC TGAGCATAAT GAAACGCTGC GTTTTAACTC TCATTTATTC 
    TTTGGGGTTA AACTCATCGT TTTAATCACA CAACAGAGAA AAGGAATTGT 
    TAAAGCCGGT CCGGTATTAA TAATTATCGA GCTTTGCAGT TTCGGTTCAC 
    TTGTTTAATA CCGTACCGAC AATTTCGGTT TAATTAGATT TCTATATACT 
    CAATCAATAT CTCTATTCCC TCCACATTCA CAACCTTTTC ATGGATC

AT3G10070.1

Model type
Protein coding
Short Description
TBP-associated factor 12
Curator Summary
Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.
Computational Description
TBP-associated factor 12 (TAF12); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: chloroplast, transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIID subunit A (TAIR:AT1G17440.2); Has 50598 Blast hits to 32470 proteins in 1374 species: Archae - 31; Bacteria - 3770; Metazoa - 21452; Fungi - 11498; Plants - 4385; Viruses - 864; Other Eukaryotes - 8598 (source: NCBI BLink).
Link
InterPro Scan - TAIR