1. Home
  2. Mutant Lines
  3. GT20410

GT20410

CSHL Arabidopsis genetrap mutant lines

Original: GT20410

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20410

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 56109 [Map]; Strand: w
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -2660; Region: intergenic
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 1090; Region: intergenic
    Flanking Genome Sequence: GT20410 - 5-prime edge 
    GTGGAACATG TTCTTCTCTC TCTACTATTT ATCAGTGACT GATTACATCA 
    ATTTTAATTC TAATAGTATT TGCTAGACCT CGCCTGGACC GGTCAATGTT 
    TCTACTTAAT GCGCTCATCA AACGGTTACC ATTTGAATCT AGACATGTTG 
    TTGATGTAAA AAACTTGAAT CTTTAACTGT TTTATGCGGA AGCTCTCACT 
    AAATCTCTCT TTGTTCGATC A

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR