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GT20025

CSHL Arabidopsis genetrap mutant lines

Original: GT20025

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20025

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11647827 [Map]; Strand: c
      • AT4G21960.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT20025 - 3-prime edge 
    AGCTTCGATG CCTTCTCTTG CGGACAAGAC GAGAATGTCA GAACATGAGA 
    CAACACCAGG ACACTCCCTC TCGAGAGCTT CCTTGATCTC CTCGATGTAC 
    CTAAAGTTTC TAAGTCCGAA GCTCCTGTCG TGTTCTTTCT CTCCTAGCTC 
    TCTTCTTGTC GAATCCAGCA AAAGCGACGC ATCACATGAC TGTTTAACCC 
    AAAAAAACAG AGCAAAACAG AGTAAAATCT TTAGATCTGT TTTAGGTAAA 
    ATATCAAAAC CCATCATGCA AACATATGAA AGATCATTGT AAGAGAGAGA 
    GTTTTCGGAC CTCAACGGCG CA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11647696 [Map]; Strand: c
      • AT4G21960.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT20025 - 5-prime edge 
    AGTCTCTTTT GGGCCTTATT TTGTTCTTCG TCTCTCTCGA CTACTGCTTG 
    CTGTTTTTTT CCTTTTTTGA CAAAACTGTG TGGGGTTGGT GTAGGTAGGA 
    GGACCTTATA TTCCTTTGAA GACAGGAAGG AGAGATGGAC TTAAAAGCAG 
    GACGGATATG CTCGAGTCAT ATCTTCCCGA CCACAACGAG AGTATCTCCG 
    TCGTTCTTGA AAAGTTCAAA TCCATCGGTA TCGACACTCC CGGCCTCGTC 
    GCCCTCCTAG GTACCTTTTA TCTTTCTCAT CCTTGATTAT TTGTCACTAG 
    GCTCCGGAAA AAACGTAACG CTTGAAATTA AAAACTCTTG ACCAACCGAG 
    ATATTTTGTT GCTGCTGCCT TAGATTAAGG GTATTTCAGT CAATTTACTC 
    ATGCATGAAA CACTCTTATG ACTAATGAAC CACTACTAAA GCTAACTTTA 
    TTGAATCACA AAAGGAGTGT ATGCGATCTG AGTTGAACTT TGAAAGTTAT 
    CCTTATCCGA TCTATCACTA GTACTAACAA ATAAGACAGG ATAATCCTTG 
    TTTATGCCCC GGTACAATAG CCTAGCACAA GGTTATTTTG GTCAATAAAC 
    TCATGCATGC TTAAACATAC TAATCAAACT AATTGACTTT ACTCTTATGG 
    GATCTGAATT TAG

AT4G21960.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Curator Summary
Encodes AT4g21960 (AT4g21960/T8O5_170).
Computational Description
PRXR1; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G37130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR