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GT19950

CSHL Arabidopsis genetrap mutant lines

Original: GT19950

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19950

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13103585 [Map]; Strand: c
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT19950 - 5-prime edge 
    TGTGTAAGTT GTTTAACCCA AGCGCATATA CAACCCATAA TACACACCCC 
    ACAGTTCTGC TAGCGGTGCT GAACACCGCC CAATGTTAAC CGCAAAGCCT 
    CCACACCATG CACCCGCACT GTTCCTCAAC ACACCTCCGG CTGAAGCTAA 
    CCCCGGGTTC CCACGTGAAG CTCCATCTGT ATTGATCTTG TACCATCCCT 
    CCATAGGAGG TGTCCAACGT ATCGGTTTGT TCACTCTTAA CCCCGACGGC 
    CTGAGCTCGA CTACCCGCGA GTAAGCTAGC GACACCTCCG CAGCTAGGTC 
    TTTTATGAAG CGCACCCGAT CACGGCATGT TTTATTCTCC CCAAAAATAT 
    TGCTACACCG CCATTTCCAA CCCCACCAAA CCGCCATAGC AAACATCGTC 
    GACCAGTCAC TACCCTCTGC CATAATACCT TGCCTTAGAT TCGAGTAGAG 
    CCACTCCAAT AAGGACATAG TGAAGAACGA CTGCTGCAAT CTCCTTGGTA 
    CAATACGATC CCATATGCCC GACATAGCGG GACAATCCCT AAGAACATGT 
    ATGATTGATT CTATGCCTCC TCGACAAACT TGACAAACAT CAGAATTACA 
    CAAATGCCTT CTCTTACGCT CGGAGTTCGT CATAATTGCT TGGTTCACTA 
    TCAACCAAAG AAAAACCCGT ACCCGTTCCG GTGCCTGGAC TTTCCACACA 
    CGCCCATATA AACTACTCAT ATCCTGCCTC GGAGAATCAT CATTAGTCAA 
    CAATGCAACT GCTGATTTGA CTG

AT3G32110.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.9e-52 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)
Link
InterPro Scan - TAIR