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GT19885

CSHL Arabidopsis genetrap mutant lines

Original: GT19885

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19885

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 780713 [Map]; Strand: c
      • AT4G01810.1 - [+] show detail - Sec23/Sec24 protein transport family protein
        Distance: -358; Region: promoter
    Flanking Genome Sequence: GT19885 - 5-prime edge 
    GGTGGTGTTT ATGCTTCGCT TGTTCAACTT CACATTAGTG CTTCTAGTTG 
    ACAAACAATT GTTTTCCTAA GTCCTCTCAA AATATATTTA TGAGCTTAAG 
    GTATTTTTTT ATACTAACAT TGTTTCTAAT TATGTAAAAG CTTTGACAAA 
    AAAGGAAGTG AACCAAAAGA AAATTGGTCT TTAACCAC

AT4G01810.1

Model type
Protein coding
Short Description
Sec23/Sec24 protein transport family protein
Computational Description
Sec23/Sec24 protein transport family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT2G21630.1); Has 8290 Blast hits to 5679 proteins in 621 species: Archae - 16; Bacteria - 1021; Metazoa - 2159; Fungi - 1153; Plants - 2353; Viruses - 447; Other Eukaryotes - 1141 (source: NCBI BLink).
Link
InterPro Scan - TAIR