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GT19845

CSHL Arabidopsis genetrap mutant lines

Original: GT19845

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19845

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3124576 [Map]; Strand: c
      • AT3G10114.1 - [+] show detail
        Distance: 4551; Region: intergenic
      • AT3G10116.1 - [+] show detail - COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
        Distance: -1447; Region: intergenic
    Flanking Genome Sequence: GT19845 - 5-prime edge 
    ACGAGGTCTC GGTTTTTGTG AAACATTTTC ACTAATAGCA GGCGTTGAGC 
    TCGGCTCATT TATAAGTGTG ACTGCGAGCG TTGAGCTCGG ATTAACTGCA 
    AGAATTATTT TGTCTTTTGA ATGTAGCTCG ATGCGAGGTG AACTAAGCTT 
    TTTGAGTCGG GACTCAATTT AGAGCTTGAC

AT3G10114.1

Model type
Pseudogene
Curator Summary
pseudogene of glycosyl hydrolase family 81 protein
Link
InterPro Scan - TAIR

AT3G10116.1

Model type
Protein coding
Short Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Computational Description
COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family; CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); Has 64 Blast hits to 64 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR