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GT19808

CSHL Arabidopsis genetrap mutant lines

Original: GT19808

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19808

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4786836 [Map]; Strand: c
      • AT5G14800.1 - [+] show detail - pyrroline-5- carboxylate (P5C) reductase
        Distance: 0; Region: intron4 (CDS)
      • AT5G14800.2 - [+] show detail - pyrroline-5- carboxylate (P5C) reductase
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT19808 - 5-prime edge 
    ACTTTCTCCC TGATCAGAGT GTTCGCATTT GTGATATTTC TGAATTTTGT 
    TTGTGATTTC TGTTTCTCTC TGAAGCTGTC AAATGCTTAC ATTTGCCAAT 
    TATGTTGTGT GTATATAGTT ATGAGCCTTG GCACAGGAGC AACGGAAGAG 
    GATGGAGCAA TTGTTGCTAT GTTGTTTGGC GCGGTGGGGA AGATATTGAA 
    AGCTGATGAG AAAATGTTTG ATGCTGTCAC TGGTCTCAGG TACAGGAAAA 
    CACTGTAGCT GCTGAAATGC TTGAGTTGTT CAAGTCACTA ATCAAGAAAA 
    TTTCAAACCT TTTACAGTGG AAGTGGACCA GCATACATAT TTTTAGCAAT 
    TGAAGCTTTA GCCGATGGAG GAGTAGCTGC TGGTTTACCC CGAGAGCTTG 
    CATTGA

AT5G14800.1

Model type
Protein coding
Short Description
pyrroline-5- carboxylate (P5C) reductase
Curator Summary
Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.
Computational Description
pyrroline-5- carboxylate (P5C) reductase (P5CR); FUNCTIONS IN: pyrroline-5-carboxylate reductase activity; INVOLVED IN: response to salt stress, response to heat, proline biosynthetic process; LOCATED IN: cell wall, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7885 Blast hits to 7882 proteins in 2434 species: Archae - 115; Bacteria - 5234; Metazoa - 373; Fungi - 241; Plants - 70; Viruses - 0; Other Eukaryotes - 1852 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G14800.2

Model type
Protein coding
Short Description
pyrroline-5- carboxylate (P5C) reductase
Curator Summary
Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.
Computational Description
pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink).
Link
InterPro Scan - TAIR