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GT19718

CSHL Arabidopsis genetrap mutant lines

Original: GT19718

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19718

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 140611 [Map]; Strand: w
      • AT4G00320.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19718 - 5-prime edge 
    GCTGTCACAC AGCACGAAGA ATTATTGCTG ATGAATTTGA TATGGAAAGA 
    ATCTTCAGAA CCTGAACCTT GCTTTGTGAG TGTTTCTGTC CGAACCCTCA 
    AGATACTAAA ATTTTCTCGT TTTGAAAATT TTATGAAGGC TAAAAATTTT 
    AAACCGATCG TGTTATTGTC ATTTGATATT CCAAATCTAG TCTACTTAGA 
    GTACTTGGAT ACAATTGCGG ACAAGTATGA ACAAGTGAGG TTTGACTCGC 
    TTGTTAAAGT TAGTATTGGT CTTTGTAAGA CCTCTAAACA GATTGAAAAT 
    GACAATAATA ATGTAACAAA GCTTTTCATG GGAATATGCA ATGTCACGAT 
    TCTCTACTTG ACTGAAGATA CTCTTAAGGT TAATCACATC TTTCTCCTAA 
    TCTATTAAAT TTCTACTCAG ATATTGATAA GTGAGTAATC ATATATGTAG 
    TTGATTTGGT TTCTCTTTCA GGTACTTGGT TGCTGCCGTG AAACAATGCC 
    GGTATTCGAG AACTTAATTC ACTTAACTAT TAGGACTGGA GTACATATAG 
    GATGGAAATC ATTACCACAT CTACTCAAGA ATTGTCCAAA TCTACAAACT 
    CTTGTCTTCG AGGTACTGTA TACATCCTTT AAATCAACCG ATGACATGCT 
    TTT

AT4G00320.1

Model type
Protein coding
Short Description
F-box/RNI-like superfamily protein
Computational Description
F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G41830.1); Has 1728 Blast hits to 1676 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR