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GT19584

CSHL Arabidopsis genetrap mutant lines

Original: GT19584

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19584

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19584 - 5-prime edge
    GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG G
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 123367 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19584 - 5-prime edge
    TAAAGAGAGA GAGTGAAACC AGAGAGGCAC CGCCGCAAAG ATAGACGACG 
    GCCTGCGTCG GAGATGAGTG AATGGCTTCG ACGACGGTAC GGATCGCAGC
    GTCTCCCATT GTTTCTCTCG GTTTCGTCTC CTCCCATTGC CGTGCCGGCA
    AAAAGCCAAA TTAAGCCCCC CAAAGTTTCC GTAATTTCAA TTTATCCCCA
    ACAGTTTCCG TAATAACAAT TCATGCCCAA ACGTTTCCAT AATTACAATT
    TATGCCCAAT AGTTTCCGTA ATTACAATTT ATGCCCAAAA TAATTTTATA
    TTGCACTAAA ACCCAAGTTG TTTGATTTAC TAGTATGTAG CCTCGGAGTC
    GTCGCCGTTA GTCCGTGAGG AGAAAATAGG CCCACTCTGG CACACTCTCT
    CTGGGTTTAG GTTTAGGTTT TTTTGGGGCT CTCTATCCTA AGAAACTAGG
    AGACATCACA CTTCACCAAG TCTACTTATC GACAATTTTA TCGTATCACC
    ATAACGACAA TAAGGGCCGG ACTAATGTTT GTACACATGT CCTCTCCTTT
    TACCCTTTTA AGGCTTTAGC TAAATCTAAA CCACATTTAT AATCGTTTAT
    TATATGAATC TTCTTCTTGC GAAAAAACAT GTCAAGCTAC TATTCTAAGT
    AAAATAAGAA AGATGAGCTG TGATTTATAT GGTAAAGTAA GATATAAAAG
    AGGTAGTACT AGTACTGTAA AAGCAGACTC GAGGAATAAA GAAAGCAGGA
    AGAGCGTGGT GGTATCTTGT GGCACCTTTC T

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR