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Mutant Lines
GT19059

GT19059

CSHL Arabidopsis genetrap mutant lines

Original: GT19059

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19059

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 22973831 [Map]; Strand: w
- AT5G56800.1 - [+] show detail - Protein with RNI-like/FBD-like domains
  Distance: 0; Region: exon2 (CDS)
- AT5G56810.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -689; Region: promoter

GGTAAAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAATTTG 
AGCTTGAGAA CTTGAAGTCT TGGAGCGTCT TCGAGTATAC GGTTAAGTAA 
ATTCCACCAA TCTTGAGAAC ATGTACATAG CTCAAGATGT TCAAGATAGA 
AGAAGGAAGT GCCACTAGGA TAAGGAATCT GCAATAAAAG CAAAAAACAA 
GGTAATTAAA AACTTTATTT GATTGAATCT TTGACATTGG TTCAGATTAT 
TAAAGAGGGG TTAGTTACCT TTGAATTTTT AGAACATAAA GAGATATGTT 
GGATTGAGGT AATAGATCCA ATAAACTTTT CTGATAGATC ACAATCAACC 
TCAACATTCG CCTTGACTAG CTTAGGCATA TTTTCGAACT GTAATAAGTT 
ACTGAAGTGA TCTTTAATGT TCAAGAACCT CAAAGAAGGA GCATCTATCA 
CAAATCCATG TACATCCGCG GGTCGAGATA CCGCCCACGA ATAATCGATA 
GATAAACTCC TCAAACTAGG CACATTGATA CTGAATATTC TCACATTGAC 
ATATGTT

3 prime edge [+] show sequence

Chromosome: 5; Position: 22973819 [Map]; Strand: w
- AT5G56800.1 - [+] show detail - Protein with RNI-like/FBD-like domains
  Distance: 0; Region: exon2 (CDS)
- AT5G56810.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -701; Region: promoter

TTACCGACCG TTACCGACCG TTTTCATCCC TAAATTTGAG CTTGAGAACT 
TGAAGTCTTG GAGCGTCTTC GAGTATACGG TTAAGTAAAT TCCACCAATC 
TTGAGAACAT GTACATAGCT CAAGATGTTC AAGATAGAAG AAGGAAGTGC 
CACTAGGATA AGGAATCTGC AATAAAAGCA AAAAACAAGG TAATTAAAAA 
CTTTATTTGA TTGAATCTTT GACATTGGTT CAGATTATTA AAGAGGGGTT 
AGTTACCTTT GAATTTTTAG AACATAAAGA GATATGTTGG ATTGAGGTAA 
TAGATCCAAT AAACTTTTCT GATAGATCAC AATCAACCTC AACATTCGCC 
TTGACTAGCT TAGGCATATT TTCGAACTGT AATAAGTTAC TGAAGTGATC 
TTTAATGTTC AAGAACCTCA AAGAAGGAGC ATCTATCACA AATCCATGTA 
CATCCGCGGG TCGAGATACC GCCCACGAAT AATCGATAGA TAAACTCCTC 
AAACTAGGCA CATTGATACT GAATATTCTC ACATTGACAT A

AT5G56800.1

Model type: Protein coding
Short Description: Protein with RNI-like/FBD-like domains
Computational Description: Protein with RNI-like/FBD-like domains; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT5G56560.1); Has 758 Blast hits to 735 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G56810.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56820.1); Has 2124 Blast hits to 2085 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR