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GT18711

CSHL Arabidopsis genetrap mutant lines

Original: GT18711

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18711

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3107984 [Map]; Strand: c
      • AT3G10080.1 - [+] show detail - RmlC-like cupins superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18711 - 5-prime edge 
    ACCAAAACCT GTGACATCTC CTTACCATGA CCATCACTTC TCCACCAATC 
    TCCCTTGCAA AAACTCCTCC GAAGTAACCA CCGAAGATTT TGTCTTTTCC 
    GGTCTAAAAA CTGCCGGAAA CTTCACGGAG ACGGGGTTCG CCACCGTCCC 
    AGTAGGCCCA GAAAACTTCC CCGGCCTTAA TACATTAGGC ATCTCGTTTG 
    TCCGGGCTGA TCTCAAACCC GGATCCATTA ACCCACCACA TTACCATCCG 
    CGGGCGACGG AAGTAGCCCA CTTGGTTAAA GGACGGGTTT ACTCTGGTTT 
    TGTGGACTCG AACAATAAGG TTTACGCTAA AGTGATGGAA GAAGGAGAAA 
    TGATGGTTTA CCCAAAAGGG CTTGTACATT TTCAGATGAA CGTCGGAGAT 
    GTTACGGCCA CGATTGTCGG CGGACTTAAT AGCCAAAACC CTGGTATTCA 
    GAAGATACCG TCCGTGGTTT TTGGGTCAGG GATCAATGAG GAGTTGCTTA 
    TGAAAGCTTT TGGGTTGAGT CTTAAGCAGA TTGGTACGTT GAAGAAAAGA 
    TTTGATCCTG TCATGTCTAA TGAACATTGA TGTTTTCTCT TAAAGTCTTA 
    TCGAGATTAT TACATCGAAG TTATCTTTTA TGTGATGGTA GTTCTTGATC 
    A

AT3G10080.1

Model type
Protein coding
Short Description
RmlC-like cupins superfamily protein
Computational Description
RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT1G18980.1); Has 1595 Blast hits to 1591 proteins in 125 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 57; Plants - 1448; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR