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GT18632

CSHL Arabidopsis genetrap mutant lines

Original: GT18632

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18632

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 69806 [Map]; Strand: c
      • AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
      • AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT18632 - 5-prime edge 
    CTTTATCCCC TCTTCTTCCT CATAGGTATC ACATAGCACT AGTTTCAAGA 
    TAAACCTAAT GGGTACCTCG AAAGCTTTGC GATCTCTTCT CATCTTGCTG 
    CTCCTTAACA TAACATTCTT CTTCGGCCAT GTTACACCAG GAGCCACCGT 
    CAAGCCATGC CCTCCCCCTC CCGCAAAACA AGCCACCACG AAATGTCCAA 
    GAGACACACT CAAATTTGGA GTGTGTGGGA GCTGGTTAGG TCTGGTTAGT 
    GAGGTCATCG GTACACCACC GAGCCAGGAG TGTTGCTCGC TCATCAAAGG 
    TTTGGCTGAC TTTGAAGCTG CCGTTTGTCT GGGCACTGCA CTTAAAACCA 
    GCATTCTCGG AGTTGCTCCT GTCAAAATTC CCGTTGCTCT CACTCTGCTT 
    C

AT4G00165.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00165.2

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR