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Mutant Lines
GT18588

GT18588

CSHL Arabidopsis genetrap mutant lines

Original: GT18588

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18588

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 65489 [Map]; Strand: c
  - AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
    Distance: 10; Region: intergenic
  - AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
    Distance: 3784; Region: intergenic
Flanking Genome Sequence: GT18588 - 3-prime edge
```
GGAGAGAACT ACATGAGAGG CTCTCACCAT TTCTAAGTTT TAATGTCGCT 
TTTCTCAAAA TTACCACCTT GAATTAAGTT TTGTCTCCTC CAATGGTGGG 
GATCTCCTGC GAAAACAATC AATTTTGTAA AACAATACAT ATATGTTTTT 
GTTTAAAATA TATGCTTGCT TTTACTGGCT CCAAAACATT GAAAATGTAC 
AATCAATCAA AAGAGTACTA GAGACATTGA AAACGTACAA TCAATTTGTT 
ATCATTAAAC AAACAAAATG GGGAAGTTTT GAGGGAAAAG TTTCTCACTT 
GAGCTATGTA CTCAGCAAGA CCATGAGTCT
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 65297 [Map]; Strand: c
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 0; Region: exon4 (CDS)

ACCCTAAGAA GAGTCTGATA CATGATAAGA TGTATCGAAT TTGAATACAA 
ACTGGCATGA ATTTGAAGCC CTGACCACAC CATCTAATTC ATTGTGCACC 
TTACGTCTCT CTTTCAACTT GTCGAGCTCT TCCGAGTCAA CAGGATTTGT 
CGAGAAAGTT GCCTTGTTCA ATCGTCTTGC GTTCTTTAGA ATGTATGTAG 
CTATTTCTTT CT

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR