1. Home
  2. Mutant Lines
  3. GT18202

GT18202

CSHL Arabidopsis genetrap mutant lines

Original: GT18202

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18202

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22972888 [Map]; Strand: c
      • AT5G56795.1 - [+] show detail - metallothionein 1B
        Distance: -439; Region: promoter
      • AT5G56800.1 - [+] show detail - Protein with RNI-like/FBD-like domains
        Distance: -101; Region: promoter
    Flanking Genome Sequence: GT18202 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGA 
    CCCAGGACAT GGTCTACGCT CTTCTACTAC TTATTAATAT TATATATGAG 
    TTTCTTACGA TCCATATATT ACATCAGATA TCCGTTTTAA GATTTTTTAA 
    AAAATGTTGA CACAAAAAAA AAGTTTTGGA CGACTAAGTG CCGTCATCAA 
    TCCATTGGAT TACATCATCA ATCCATTGGA TAACCCTTGG TTTGATCTCT 
    CTGAGGTGAG TATCGAGTCG TGTTATGCAT CCCAAACATT GCCGCGTAGC 
    TTGCGTAGTA GGCATTGGAA TCTCAAAACA TTGAAACTTA AAAAACTAAG 
    TTTCGTGGAT ACTGATGCTT ATATGTGGTT TGAATCACTC AAAACACTGC 
    ATCTTCTCTC TGTGAGGTTC TCTGACGACA AATCTGTTCA GAGGCTTTTA 
    AGTGTTTGTC CGAAACTTGA AGATTTAGTT GTGAAACGAA CAACATATGT 
    CAATGTGAGA ATATTCAGTA TCAATGTGCC TAGTTTGAGG AGTTTATCTA 
    TCGATTAT

AT5G56795.1

Model type
Protein coding
Short Description
metallothionein 1B
Curator Summary
one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance. The MT1b gene, however, is indicated to be inactive.
Computational Description
metallothionein 1B (MT1B); FUNCTIONS IN: metal ion binding; INVOLVED IN: response to metal ion; LOCATED IN: endomembrane system; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G56800.1

Model type
Protein coding
Short Description
Protein with RNI-like/FBD-like domains
Computational Description
Protein with RNI-like/FBD-like domains; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT5G56560.1); Has 758 Blast hits to 735 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR