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GT18168

CSHL Arabidopsis genetrap mutant lines

Original: GT18168

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18168

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13543 [Map]; Strand: c
      • AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -184; Region: promoter
      • AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT18168 - 5-prime edge
    TTTCCATCCT ACTTTCTCCC TGATGCCGAC AGCGAGAGCG CGAGCGCCAT 
    GTTTGCAAAT TGCAATTTCC ATGGTTAGGT TGTTGCACGA AGAAGAAGAA
    GAGATACTCT GTTATTTGGG TTTCTTTTCT AAAAAGCCCA TTTGGGTTTT
    ATTTGCTTTA TCTCATGAGA CTAAGCCCAA GCCCAAGGAA ATAGCTTGCA
    CGTGCGCGTC ACGTGTCTAC GATAAAACCC CAGCAACGGC GAGCGGCTTT
    GCCTTGCTCA TTCAACCTCG CTCGTCGTCG TCGTCGTCTC CACTTCGATT
    TTTCAATCAG TAATATTGGT GGTTCAGAGA TGATGATGAT GAATCTTTTA
    AGGAGATCAG CGATAGCCAT CGGCCGCCAA TCAAAATCGA AACTGGCGTC
    GTTTTCCTCC GCTACACAAC CTTGTTCCGG AATCCCAAAA TCGGGAAGGC
    TTTCGTATTT C

AT4G00026.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00030.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR