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GT18081

CSHL Arabidopsis genetrap mutant lines

Original: GT18081

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT18081

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 114770 [Map]; Strand: c
      • AT4G00250.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -804; Region: promoter
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: -201; Region: promoter
    Flanking Genome Sequence: GT18081 - 5-prime edge 
    CATTGATATA CTCAAGAAGA GACCATTGCA AGAGACTTTT ATTGTGGTTA 
    AACACTCTGG TTCGGTTCAG GACTTTCAGA ATTCATATGT ATTGGATTGA 
    AATTTCTTGA ACCGAAGTAG ACCGAAAGTA TAGTTCGGCT CGGTTCAATT 
    TTAATAGCAT AAATTTCGAT TTGGTTCAAG ATAAAATATT GGTGTCAAAT 
    TGGAACCAAA AACCAATTTC ATGT

AT4G00250.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00238.1); Has 626 Blast hits to 580 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 135; Fungi - 97; Plants - 294; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00260.1

Model type
Protein coding
Short Description
Transcriptional factor B3 family protein
Computational Description
maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR