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GT17933

CSHL Arabidopsis genetrap mutant lines

Original: GT17933

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17933

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15975385 [Map]; Strand: c
      • AT2G38120.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: GT17933 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACATT TACTTGATGG 
    CGACGTTATA CGTGTTCACG CTAACGATTC CGTCAGCTGC CGCCGTTTAC 
    TGGGCTTTCG GAGACGCACT TCTCGACCAC TCCAACGCTT TCTCTCTTAT 
    GCCCAAGAAC GCGTGGCGTG ACGCCGCTGT TATCCTCATG CTCATTCATC 
    AGGTATACAC ATATAACATT TTTGTTCTTT CTTTTTTAAT AAATTTTGAT 
    CATGAGAGAT TAATGCAACG TGTTCTTGTT CGTGCAGTTT ATAACGTTCG 
    GGTTCGCTTG TACACCTTTG TACTTTGTGT GGGAGAAAGT GATTGGGATG 
    CATGACACAA AGAGCATTTG CTTAAGGGCT TTGGCTAGAT TGCCTGTGGT 
    CATACCTATT TGGTTCTTAG CTATTATCTT CCCCTTTTT

AT2G38120.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Curator Summary
Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.
Computational Description
AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR