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Mutant Lines
GT17641

GT17641

CSHL Arabidopsis genetrap mutant lines

Original: GT17641

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17641

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 29573656 [Map]; Strand: w
- AT1G78620.1 - [+] show detail - Protein of unknown function DUF92, transmembrane
  Distance: 0; Region: exon5 (3UTR)
- AT1G78620.2 - [+] show detail - Protein of unknown function DUF92, transmembrane
  Distance: 0; Region: exon5 (3UTR)

AACGGTAGAG GTTTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATTTG 
CAATTGTCCC GTAGATAGAG AAACTTATAA AATTTCTTCT GCTTAGGGAT 
CCATTCACGT GATTTCTTCT ATTTCCTTCA CATGAAGTCC AAATTCTATT 
GCGACATCAT AAATTGAAGA ACATGTAAAA AAAGTTATGT AGCAAATAGA 
GAAAGTAGTG ATGAAAATGT AAGAAAAAAG TTTGAAGAAA AGGCAACAAC 
AAAGTACCAA GAATTGGTTG AGAAAGAAGT CGTCGAAGAG TCGTGATTTT 
CTCGAATACA TTCTTCTTTT TTGTCATTAT TATGTNCTTG TTCCTGTCAT 
CTTTAGAAAT ATTCTCGACG TTGCATAAGA TAGTGTTTCT GGTGGCCAAT 
TTTAATTTAG AAGCCTCTAG AGAAAAATGC ATCCATCGGC CTAACTGTTA 
AACAAGACAG CGAGACTTAA CAGGCTTGTT TACTTTTAGA CTTATGAAAC 
ATGAAGAAAA ATTATACAAT GCGTTTGCTT CTACGAACCT GTGG

5 prime edge [+] show sequence

Chromosome: 1; Position: 29573752 [Map]; Strand: w
- AT1G78620.1 - [+] show detail - Protein of unknown function DUF92, transmembrane
  Distance: 0; Region: exon5 (3UTR)
- AT1G78620.2 - [+] show detail - Protein of unknown function DUF92, transmembrane
  Distance: 0; Region: exon5 (3UTR)

AAATCTCATC CAATAATTGC TAGACAATGG TCCCAGAAGT TTTTTCCCCT 
CATTGATGTT GGACTACTAG TTGTACACAA CAGAGTATAA TTTACAACAC 
CACTGAATAC GTAAGGCTGT GTTTAACAAT ATAAAAAAAG AATCTAACCT 
CACTGAGAAT ACATGACCTT CGTGGCAGGT TTTACTTGAC CCAGTTCTGG 
AGTATAAACT GTTGCATCAA AATCGCCACA ATGCTTCCCA AGCTTATGTT 
GATCACGTTG ACTACATCAT TGTTTAGCTA CACATAGCAA AATAGTGACT 
AACATGAGAC AGAATACAGT CGAGATCATT GCATTCTTGT TTAGTTGGTA 
ACTAATTGCA AGGAATGGAT TCATAAGACG AAAACTTAAA AATTCTGTAT 
GTATTGAATG GAAATCGTTT TC

AT1G78620.1

Model type: Protein coding
Short Description: Protein of unknown function DUF92, transmembrane
Computational Description: Protein of unknown function DUF92, transmembrane; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794); Has 865 Blast hits to 865 proteins in 301 species: Archae - 133; Bacteria - 238; Metazoa - 78; Fungi - 68; Plants - 85; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G78620.2

Model type: Protein coding
Short Description: Protein of unknown function DUF92, transmembrane
Computational Description: Protein of unknown function DUF92, transmembrane; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF92, transmembrane (InterPro:IPR002794); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR