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GT17510

CSHL Arabidopsis genetrap mutant lines

Original: GT17510

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17510

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 126661 [Map]; Strand: w
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 195; Region: intergenic
      • AT2G01240.1 - [+] show detail - Reticulon family protein
        Distance: 1779; Region: intergenic
    Flanking Genome Sequence: GT17510 - 5-prime edge
    TCTTTCTCCC TGAATTTAAT GCATTACATT GTGCTCCAGT TTTTCATTGT 
    TGTTATTGGG TTTTTCCAAT ATATGTAGGC CTAAAGTCAT ATGGAAACTA
    ATCTCAATGG ATACTTGGAA AGTATAAAAG TCGGCCCAAT AGTGAAGTGC
    GTGATTTGTT GAATTACAAA ACGCAAGTCG TTTACCCACT CGCATAATAA
    GCGCGTCGAC GCCACCTCCC CGAAATCTGT GGACTAACCC ATGCAGAAAT
    TTGCCGTTTT TCGTAAAATT TTAAAAGTGG GCGCGTGTGG GTCGTTTTAG
    TTTGAGGTGA GGAAAAAAGA AGAAGTAAAC TTGCATTTGA TCGGATCTCT
    TCTCAACTTT TTTTTTTGTG GGCATGCTTT TTAGTCTTAA CTCTAAATTA
    AACAAACAAT AACCTTTGCT TAATTAAACA AACAATAACC ATTGTTGGCA
    TGTTCACATG AAAAATGCTA ATACATGTCC TATTT

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01240.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR