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GT17458

CSHL Arabidopsis genetrap mutant lines

Original: GT17458

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17458

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 133938 [Map]; Strand: c
      • AT2G01250.1 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G01250.2 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT17458 - 3-prime edge 
    GAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAA 
    TGATGAACAA GAGCTTAGCT TCAGGGTCAA CATAGAAACC TCCCTTAAGC 
    TTGGCCTCGC GTTTCAACGA GATCAACTCC TTCTCCTATC AAGGATAAAA 
    GAGAAGATCA ACTACAGTTT CCAAGTATTT GTATTTGGAG GATAAAAATG 
    TTTACCTTCT CGGCATATTC CTTGGAGTAT TGCTCGGCTC TTTTGAAGAT 
    AAGCTTCCTG TTCTCGGCGT TCTTCTTCTT GGCGGCTTCA ACATTCTGCT 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 133848 [Map]; Strand: c
      • AT2G01250.1 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: intron3 (CDS)
      • AT2G01250.2 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT17458 - 5-prime edge 
    TGTTATACTG TTGTTGTTTG CCTTATAAGC ATTTCTAAAG CCAGTGTCTA 
    TGTTGTTGTC TTATCTGTTG TTCTTTTTAA TATTGCAGTA TCAATGCAAT 
    TGACCCTAAG ACTAAGAAGA TTCTCCAGCT CTTGCGTTTG AGACAGGTTC 
    GTGTATTATT GTGTTTGTGT AGATTAGTCT TTTGATGAAT TGGCATAAAC 
    TGCTAGGTTG TTTCAATACA ATGTTGTCAT TAGTCTTAGG TTAGGTCTTG 
    AAAGTTGGAA TCTTTCCATG TAATTTGTTG ATAATCAGTT GGTTTGATAA 
    TGTCACATT

AT2G01250.1

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1297 Blast hits to 1295 proteins in 388 species: Archae - 210; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01250.2

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
Link
InterPro Scan - TAIR