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GT17380

CSHL Arabidopsis genetrap mutant lines

Original: GT17380

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17380

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 123644 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron2 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT17380 - 3-prime edge
    GAACCGCGCA GTGTCATTAT AGCAATCGAT GTTTCTCTTC TCTCCATTAA 
    TCAGCTGATT TTCGTTCGCT CTCTTTTAGG TTCCGAGCCA ACACTGTAGC
    CAAGCATTGG CCAAGGAGAT GGCCTTGTTA GCCTACAATC GGGCGCTTAA
    GCTCTCTAAA CCAGGTACTT GCTCTCTTTC TTCACTTCAC CATCCTATGT
    TAGCAAGAAG TCCTGGAATA TAGTAATGTG GATTGGTGTA ACTTCCTTAA
    TCTTGTGGAT AGGATATCCG GTTCTCGGTG TCGGGTTTAC GGGATCATTG
    GTAACTTCTC GTCCTAAGCG TGGAGATCAC AGGTTATGCA ATTTTGTTTC
    CTGCTCTTTA TAGTAATATA CTTGTTTGCT TGAAATGAAA GCTATCACAA
    TAAGCTAGTT CTCTAGCATG GCCCTTTAT

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR