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GT17099

CSHL Arabidopsis genetrap mutant lines

Original: GT17099

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17099

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11035354 [Map]; Strand: c
      • AT4G20480.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17099 - 3-prime edge 
    GTCCCTAGCT TTAAGGATGT TCCGAGGGAC CTCTGATAGT ACGCCAAAGG 
    CAGTGATGGT GATAGGACCT GTGTAGCCTA ACTTCCTCAA ATTCCGTTTG 
    ATACACGGAC CCACCAGTCG AGCATCATAG CCATCGGGAA CCGGAAACGA 
    TTTTATGTCC CAGAAGACCG ATACTGGGGC CAAAGCTGCC TCCTCGGTAG 
    GCGGAGGCTC CATCACCCTC ATCATCGGAA AATCAAACCT TAAAAAAAAA 
    AGAATCAAAT TCATTTTCAT TCGACAATCA GAGAACCGAG AGGAACACGG 
    TTGCTATAAA AGTTGTAGGG TTCTTCTATC TATGCAATCG GGGGAGGAAT 
    TTTGCTTAGA AAATCAAACT TCAGAAAGAT AAATTGACCC CCCGATCGAG 
    AGAGGGAGAT ATAGAGGAAC ACAGCGGCTA ATCGGGTTCT ATCTATGCAA 
    TCAGCCGATC AGTTTTGAAA GAAACATGAT GAGATCGGGT TCTATCTATG 
    CAAGCAGCCG ATCAGTTTTG AAAGAAACAT GATGAGATAA GGACCGAGAA 
    TTTTCCCTTA AAGATGTTAG CGGGTGGGAT CGATCTCGAT ATCGCCGACT 
    AGGTTTTCTT ATTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11035236 [Map]; Strand: c
      • AT4G20480.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT17099 - 5-prime edge 
    GTGTATTCCA CTGGAATCTC TCTTAAGGAG GTCATTAAAA GTTAGTATCT 
    TCTCATCCTT ATTCCATAGC TAGAGTCTTA ATGGGATTCT CTTAATTCTC 
    TAGTTTCTCA ACAGGTCCGA CAAACATGTA TGCTCTTTTC CTTGAGTCCT 
    CTCT

AT4G20480.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR