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Mutant Lines
GT17072

GT17072

CSHL Arabidopsis genetrap mutant lines

Original: GT17072

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17072

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 1260256 [Map]; Strand: w
  - AT4G02820.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT17072 - 3-prime edge
```
TTTGTGGAAG TTGCAGACTG AAACTAACTC TGTAGCTTTC ATACTAAGAA 
ATGGTGGACG AGATTTCAGT CACACGCATT TGACTGGTTA GTCTTATAAG 
CTCCTTAGTC T
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 27301190 [Map]; Strand: c
- AT1G72500.1 - [+] show detail - LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DUR...
  Distance: -2634; Region: intergenic
- AT1G72510.2 - [+] show detail - Protein of unknown function (DUF1677)
  Distance: -2176; Region: intergenic

TCCTACTTTC TCCCTGTTCA CTAGTTCTAT GCGCTAAATG GGCGTAACAC 
CGAAGGGTCC AATTGATATT GTATTAAGCC ACGGGCCTCA GTTTGATTTG 
ATCTGTTGAT CATTTAAACA ATGATAATGG GCCTGGGCCT CTGAGAGCCA 
GATCGAGTAT TTATGTATAT GTATCACATG TTTTAGTTAT TTTGTTGATA 
TCATATGTTA GCTTTATCAT CTACTTATAA GTGTTGGTAA ATAATTAACG 
ACATACGAGT AAATTATAAC ACATCTATAG GAGAAATATA ATATACGGAT 
ATAAACTAGA AACATGGCAA AAAAAGACAT ACTTATATAA GCATAAAACA 
ATTTAATTAG TTTGATTCAT AAGCAACTTT AGAGGAAATA TAAACTTGAG 
ATTATTATAA TAACCTTTCG AGATACTTAC AAGCATAAAT TATATAAAAC 
TAGTTAAAAG TTTTCTCAAA ATTATTATAT TAAACAAAAT GAGTTGGTCA 
TGACACGCAC ATTCATGTCG TTTCTCAAAT GATTGTACTG AGCTTGTCAG 
TTGATGATAC ATATAGTTGA AAATAAAATG TTATTATAAC TTATGAGTGT 
ATTGACTTGA ATCATCAGAA GATAACAAAA TAATTAATTA ATTATATCAT 
AACGTAGAAA AATAAATAAA ATTGAGATGC CAGCAGCAAG CAGTGTTGTG 
GTTGGCCCG

AT1G72500.1

Model type: Protein coding
Computational Description: LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G72510.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF1677)
Computational Description: Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT2G09970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G02820.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02150.1); Has 15018 Blast hits to 7498 proteins in 232 species: Archae - 0; Bacteria - 55; Metazoa - 87; Fungi - 92; Plants - 14442; Viruses - 0; Other Eukaryotes - 342 (source: NCBI BLink).
Link: InterPro Scan - TAIR