1. Home
  2. Mutant Lines
  3. GT17017

GT17017

CSHL Arabidopsis genetrap mutant lines

Original: GT17017

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17017

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26017758 [Map]; Strand: w
      • AT5G65130.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17017 - 3-prime edge
    CCATAGCCGG GTTCGGTTTT TAGGTAGCCG AGTCTCAGCT ACCCATTTAC 
    TCCATTGCCT CTGACTTACA CCTCG

AT5G65130.1

Model type
Protein coding
Short Description
Integrase-type DNA-binding superfamily protein
Curator Summary
encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.
Computational Description
Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G39780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR