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GT17000

CSHL Arabidopsis genetrap mutant lines

Original: GT17000

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17000

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 222101 [Map]; Strand: c
      • AT1G01610.1 - [+] show detail - glycerol-3-phosphate acyltransferase 4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT17000 - 3-prime edge
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TACTCAAAAG 
    GAGTCTTGCC ACCACCGTTT ACCGTCATTT CTTCGGGCAA ACGGTCCAAG
    AAAGTGGCCT CGTAGCTAGG TCGGGGGTTC ATGAAGAAGA AGTACGGATC
    CCAGAATTTC ACACCTCTAA CTGTCGTCCC GTTGAACATC CCTTGCTTGC
    AGTTCATGGC CACCCGACCG GATCGTATCG GTATATTCAT CTCTCTCC
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 222021 [Map]; Strand: c
      • AT1G01610.1 - [+] show detail - glycerol-3-phosphate acyltransferase 4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT17000 - 5-prime edge
    AGGTGCCTAA TTACGTTCAG AAGGTGATCG GTGGAGTTTT GGTGTTCGAA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 222043 [Map]; Strand: c
      • AT1G01610.1 - [+] show detail - glycerol-3-phosphate acyltransferase 4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT17000 - 5-prime edge
    TCCTACTTTC TCCCTGCTTT TGAGGTGGCT AATTACGTTC AGAAGGTGAT 
    CGGTGGAGTT TTGGGGTTCG AATGTACTGA ACTTACAAGG AAGGATAAGT
    ATCTGTTGCT TGGAGGCAAC GACGGAAAGG TTGAGTCTAT CAATAAGACC
    AAGTCCATGG AGTAATAATC CAGCTAGTCT GGTTGCTGCT ATTTTGCTTG
    GGAGTGAAGT TAGGTCTTTC GGGTTTTCCC AATTACTTTT TTTTTGGTTT
    TTTTCCAGGA TTGGTCCAGG AAAATTTTTT TTTAAAAATC CCCGGGAAAA
    AGAAACCCCC TTTGAATCAA AAGACCGACA TGGAGGGGAC CCTTTCCCCT
    TGCCTTAACC TAAAAAGAAT TGGAAACCCC CCTTGGTTTT AAAAAATTCC
    TTAAAAAAAA CCCCTTTCCC AACTTTTTTA TTAAAAGGGG TTTAAATTTC
    CCCGGGAAAA ACCCCAAGGG CGGACCCCAT CCCACCTTTG GGAAAGGGGA
    AGGATTCAAA AATTTTTTTT TTTTTTTTTT GGTAAAGGAG GGAAATTTTT
    ATTTTGGAA

AT1G01610.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 4
Curator Summary
Encodes a protein with glycerol-3-phosphate acyltransferase activity. Involved in cutin assembly. Is functional redundant of GPAT8.
Computational Description
glycerol-3-phosphate acyltransferase 4 (GPAT4); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 410 Blast hits to 396 proteins in 34 species: Archae - 0; Bacteria - 20; Metazoa - 10; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR