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Mutant Lines
GT16994

GT16994

CSHL Arabidopsis genetrap mutant lines

Original: GT16994

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16994

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Not mapped

CACTCGACTA CCGTTCGTTT TCGTTACCGG TATATCCCGT TTTCGTTTCC 
GTCCCGCAAG TTAAATATGA AAATGAAAAC GG

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 27301081 [Map]; Strand: w
  - AT1G72500.1 - [+] show detail - LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DUR...
    Distance: -2525; Region: intergenic
  - AT1G72510.2 - [+] show detail - Protein of unknown function (DUF1677)
    Distance: -2285; Region: intergenic
Flanking Genome Sequence: GT16994 - 3-prime edge
```
GGGCCTGGGC CTCTGAGAGC CAGAGCGAGT ATTTATGTAT ATGTATCACA 
TGTTTTAATT ATTTTGTTGA TATCATATGT T
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 18433073 [Map]; Strand: c
- AT4G39730.1 - [+] show detail - Lipase/lipooxygenase, PLAT/LH2 family protein
  Distance: 0; Region: intron1 (CDS)

CCTACTTTCT CCCTGTGTAT ACACAGTCTG GATCATCTTC CTAGATAAAC 
AAACAGAAAC TGAAAAAGTC AAATTATCGA AAAATCTAAA TCTGATCGAG 
AGTGGTTAGA GATTGAGGAA GTTTACGGCG AAAGCTACGG CGGAGACGGT 
GGCGAGAAGG AGGAGGAAAG GGAGGAGAAC ATCGCGACGA GCCATTTTGT 
TTTTTTCCGG TGAACGATTT GTATTTTTTC TCTGATTTTT TTTCTGCAGA 
GGTGTATTAA TAGATGCGAA TATTATTTGA GGGAAGGGTT ATTATTGGGA 
ATTAACAATT GGGGTAATAA TCACGTGTTA TTCGGAGTAG CGTGTAATGT 
TGACGTGGCT GACTCTTATC TGTTGTGATG TGAGAATTGA GATGGATAAT 
TTGAGAGGCT TGGCGATTAC TCGGCGAGTC GGTATATGAT GGGTTGGTAG 
ATTTACGAAA TTATCCTTTT AAGTCTCTCT CTCTCTGGCA GCTTACGGAC 
CAAGAAAAAT AGTCCACTGG ATTGTATGAA ATTTTCCTTA TTAATGACTA 
CGAAATTTTT GATGGTTTTG TCTATATTAA GAATAATTCA AATTTATATT 
GAGAATAAGT AATTCTTCCC ATTTTTATTT GCTTATATAT TTGCTGTCAG 
ATTTTTATTA TTTTATGGCC AGGTATAATT TATATTTGTA AA

AT1G72500.1

Model type: Protein coding
Computational Description: LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G72510.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF1677)
Computational Description: Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT2G09970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39730.1

Model type: Protein coding
Short Description: Lipase/lipooxygenase, PLAT/LH2 family protein
Computational Description: Lipase/lipooxygenase, PLAT/LH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: Lipase/lipooxygenase, PLAT/LH2 family protein (TAIR:AT2G22170.1); Has 247 Blast hits to 225 proteins in 46 species: Archae - 0; Bacteria - 3; Metazoa - 94; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR