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Mutant Lines
GT16953

GT16953

CSHL Arabidopsis genetrap mutant lines

Original: GT16953

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16953

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 22773278 [Map]; Strand: w
  - AT3G61530.1 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon1 (CDS)
  - AT3G61530.2 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
    Distance: 0; Region: exon2 (CDS)
  - AT3G61540.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
    Distance: -108; Region: promoter
Flanking Genome Sequence: GT16953 - 3-prime edge
```
TTTACCGACC GTTACCGACC GTTTTCATCC CTATCAGGAG TTGTTGCTCT 
CGTGCTTCGA GAGCCATCAC CACCGTCCGG TTTATGAGCA ACGTACCGGA 
GGAGACGGTT TACGGAGGAC CGAAACCGCC GAACACGAAT CAGAGAGTGA 
CTTTGACGCA ATTGAGACAG AAGCATCGGG AAAGGTGAGC CCGATAACTA 
TGGT
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 22773350 [Map]; Strand: w
- AT3G61530.1 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
  Distance: 0; Region: exon1 (5UTR)
- AT3G61530.2 - [+] show detail - Phosphoenolpyruvate carboxylase family protein
  Distance: 0; Region: intron1 (5UTR)
- AT3G61540.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -36; Region: promoter

CTTTCTCCCT GACTCCTGAC TTTTCAAGCA GCCATTGTTG TTGCTGATGA 
ATGCCATTTT GGAATTAGTT ATAAATTTAA AGACTTTTGG ATAAATATTT 
TTCTTTTAAG AATAAAAACG ATGTTGGCGA CTCACGCGCT GGTGACTCCG 
ATTCCAAAGT TGACTGCTTT CGTACTCTCT CTATCTACTA CTCCATCAAG 
ATTGTCTGGT TCTGTTCCGG GTTTGATTGA TTTCTACCGT CGCCGGAGAT 
TTTGTCGTGT AATCACCTCC ATGGCTGAAG CGGGATCGGT TTACGTCGAT 
GTAGCTGGGG AATCGAAGTC GGAGCATGTT ACTGGGAAGT GGTTTTCGGT 
GCCGGAGCTC CGACTGCGTG ACCACCGGTT CATAGTTCCT CTTGATTATT 
CCAAAAGTTC TCCCAAAATT ACCGTCTTTG CTCGAGAGAT CGTTGCGGGT 
AACTTGAAAT TTGGAGCTTT TTGATTCAGA GCTCTTTCTG TGATTACGAA 
GCTAAAAGTT TGTGTCTTTT GTTTTTTGTA GTTGGGAAAG AGGAGCAAGC 
AATGCCGTAT TTATTGTATT TGCAAGGTGG TCCAGGATTT GAAGGTCCAA 
GGCCTAGTGA AGCTAGTGGA TGGATTCAAA GAGCTTGTGA AGAGTTTCGA 
GTGGTCTTAC TCGATCAAGT ATGATGCTTT CATAGTTTTA TACTCTTCTC 
TGGACAGTTT TTTTAGTCTT TGTGTTGTTC TAATTTTGTT TGTCCTGCAG 
CGAGGAACAG GCTTGTCCAC TCCTTTAACA TGTTCCTCTA TGCTTCAAT

AT3G61530.1

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Curator Summary: Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.
Computational Description: PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 7570 Blast hits to 7570 proteins in 2036 species: Archae - 128; Bacteria - 4151; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3088 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G61530.2

Model type: Protein coding
Short Description: Phosphoenolpyruvate carboxylase family protein
Curator Summary: Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.
Computational Description: PANB2; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: ketopantoate hydroxymethyltransferase 1 (TAIR:AT2G46110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G61540.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: peptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S33, prolyl aminopeptidase (InterPro:IPR002410), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); Has 1602 Blast hits to 1599 proteins in 535 species: Archae - 0; Bacteria - 1162; Metazoa - 5; Fungi - 126; Plants - 75; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Link: InterPro Scan - TAIR