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GT16562

CSHL Arabidopsis genetrap mutant lines

Original: GT16562

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16562

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9122581 [Map]; Strand: w
      • AT2G21310.1 - [+] show detail - transposable element gene
        Distance: -41; Region: promoter
    Flanking Genome Sequence: GT16562 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CTGATTACAT CAATTTTAAT TCTAATAGTA TTTGCTAGAC CTCGCCTGGA 
    CCGGTCAATG TTTCTACTTA CTGCGCTCAT CAAACGGTTA CCATTTGAAT 
    CTAGACATGT TGTTGATGTA AAAAACTTGA ATCTTTAACT GTTTTATGCG 
    GAAGCTCTCA CTAAATCTCT CTTTGTTCGA TCACTCGTGT GTTTAGACAA 
    AGAAAGTAAA ACAGACACAA GCAAATGTTA ACCCAGTTCA CGTTCAGTGA 
    TGAACGCTAC GTCTGGACCG AGATTACCCG GAAATCCACT AGAAAGCCTT 
    GGTTACACAA ACCCTTAGAA ACAAGACTGA ATAAACTTTC AGCTGCCTCT 
    CTTGCACTTA CTCTCTTAAC CCTAATGTCT CACTTATCTT CTCCTTTATA 
    CAACTCTACT CACCGCCACG CTCTCTCTTT CTTCTTCAGT ACTCTGTTTC 
    AAATGCAGAG ACAAAGAGAC AAAATGGTTG AACCATTGGC AAGAGGTTAA 
    TTACGTCTCT AGCCTTGATG AGCTGTATGA CAAAGCACGT GCGCCTCTCG 
    TGACTTCGTT TCTTTCACAA GCTGAGACCT TCTCTTTGGA TTAGAGTCTT 
    TATGACACTT TAGGCAATAC TTCCACAAAA CTCCACCTTG CCTTAGTGTC 
    AACCTTTCCT TTGCTTCCCT TCTAGTGTAA CTTGATTTCC ATCTTCGGAC 
    CATGATCTCT TTATCAGGCA CTTGTAAACC CCTG

AT2G21310.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.8e-151 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR