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Mutant Lines
GT16414

GT16414

CSHL Arabidopsis genetrap mutant lines

Original: GT16414

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16414

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 460529 [Map]; Strand: w
- AT4G01060.2 - [+] show detail - CAPRICE-like MYB3
  Distance: 0; Region: exon1 (5UTR)
- AT4G01060.3 - [+] show detail - CAPRICE-like MYB3
  Distance: 0; Region: exon1 (5UTR)
- AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
  Distance: -2; Region: promoter

TCCGATGGAG TTGGTCTTGG TTTGCTTAGT CCTGCGATGG TTATCCATGT 
CAGACAGCAC GGTATTACAA AGAAGAGGAA GAGAGAAACT AAGAGAGAGT 
GGTCGTATTT TGAAGGTTGC ACACGAACCA TCATTTCTAT TTATAGCAAC 
TAACCAAATC AAGTAACCAA CGGTCCAACG GGTTTGGTCG GTTTCTATGT 
TAATTTACTC AATTGGTTTT GTTCTCATTA ATTAAATTAA TTAATTGTTA 
TTGCAAGTTG CAAGTTTGCA ACCAATAAAA ACCACAAGTA CCCGTGACTT 
CATTTACTCC GTTGTGATGG CTTGTACTGG AACATAAGTT GTATAAATAT 
TGATACATGC CGTTAATTAA GATCATTAAT AATCAACAAC AATTGTTTTC 
AAAGCTTTTC TGATTGCTAT TCCAGTTCAT TT

5 prime edge [+] show sequence

Chromosome: 1; Position: 18927951 [Map]; Strand: w
- AT1G51070.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G51070.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: exon1 (5UTR)

CTTTCTCCCT GTTAGCGCTA TACCATGACT CTTTTTTCTT CCGATTATTC 
CCACATTGTC TCTACCTTTC CCTTTTTCAG ATTAGACCCT TTGTTTTCAA 
AAGAAACGAT TTTTAGTATC CGCCGGGGAA TCAGGAGAAT GGTGTCTCCG 
GAGAATACGA ACTGGCTTAG TGATTACCCT TTGATTGAAG GTGCTTTCTC 
TGATCAGAAC CCCACTTTCC CTTGGCAGAT AGATGGCTCA GCTACTGTCA 
GGTTAGTTTT TTGTTAATCA GATTCAAGGG TTTCTGGGTT CTGTGTTTTG 
TTTCTTTCAC CATCTATTAG TTTTGTTTCT TGGCTTTGGA CTTTTGGTGT 
TTTAGGATTG GTAGTTATAT CTGGAGAAGT TGTTATGGAT GTGTGATCAC 
TCAGTTGGTT TTTAGATGCT CTTGTTGTGA TAGAGATATT GGACTTCTGC 
ATAAATCAAT CCTCTGTTTT TTTT

AT1G51070.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic Helix-Loop-Helix 115 (bHLH115); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G54680.1); Has 799 Blast hits to 780 proteins in 147 species: Archae - 10; Bacteria - 89; Metazoa - 90; Fungi - 16; Plants - 475; Viruses - 2; Other Eukaryotes - 117 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G51070.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic Helix-Loop-Helix 115 (bHLH115); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G54680.1).
Link: InterPro Scan - TAIR

AT4G01060.1

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01060.2

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01060.3

Model type: Protein coding
Short Description: CAPRICE-like MYB3
Curator Summary: Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description: CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR