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GT16337

CSHL Arabidopsis genetrap mutant lines

Original: GT16337

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16337

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18527 [Map]; Strand: c
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT16337 - 3-prime edge 
    AACGGTAGAG GTTTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATCA 
    TATATATTAA CTTGTTCTAG TTAATGATGT CTCTAGCTTT ATAAGTAAAT 
    GATAATAATT AAGGAAAAAC GATAGATGGA GGACGAAGAA GAGAAGAAAG 
    CCGGAGGAAA ATCATCAGTT TCAACCAAGA GAAGCAGAGC TGCTGCTATT 
    CATAACCAAT CCGAACGTGT AATGATTCAC TCAACCATTA TTTTATTTTT 
    CAAAAAAAGT T

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR