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GT16336

CSHL Arabidopsis genetrap mutant lines

Original: GT16336

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16336

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176203 [Map]; Strand: w
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16336 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACCTG 
    GGATCCAAGG GACCAGCATT TTCTAGTCGG TTCTCTCCAC AGCCGCACAA 
    TTCATTCCGT CTCCGACGCT GGAGTCATCG AAACCCTAAT CTCCGATCTC 
    GATCTACCGG AGAACTCCAC TATCCTCGGT CTCGCCGTTG ACTCTACTAA 
    TCGCCGTCTC CTTGCCTGTA TCCAGAGTTT GCCGCCTCTC CCTCCCTTCA 
    GTGCCCTAGC CTCCTACGAT CTCCGCAGCG GAGGCCGTCG TGTATTCCTC 
    TCTCCTCTCC CGTCTCTTCC CGGAGACGAC GAAGACATCG CTCGTGATGT 
    CGCCAATGAC GTGGCGGTTG ATTTCAAAGG AAACGCTTAC GTCACCAACT 
    CAGCCAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176279 [Map]; Strand: w
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16336 - 5-prime edge 
    GGTTAGTCCC TCCGGGTAGC GTCCCGGCGA TCGGAAGTTG ATAACGTGGC 
    GGTTATCGGC GGAGGAGGGA ATCAGAAGTC CCAGGAACAA GACGGCGAAG 
    AGAATTGGGA AGACGAAGAA GGATCTGTAT CGAGTGGAAG ACGACGACGA 
    CATGTTCGCT TTCATCTGTG ATTTCGATTT AGGAAAATAA TGAATGGCTC 
    ATTTTTAGAA AAAATAAAAC TTTGATGTAT AAAAAGATAT GACCAAGCCC 
    ATTTATGTAA TAAACGGGCC ACATTTTGCG TGTAGTATAT AAAATAGGGC 
    CCATAAAGTT TATTGGCCTT CCTTCATTTG CTGGGTTGAT GTCAAAAAGA 
    GAAGAGGAGT GCATTGCTGT TTTATTGGCA GCTACTAATG ATTTGGTTTT 
    GCTGATGGGC TCTTAAAAGA CGTCTCTC

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR