Home
Mutant Lines
GT15952

GT15952

CSHL Arabidopsis genetrap mutant lines

Original: GT15952

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15952

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 649981 [Map]; Strand: w
- AT2G02450.1 - [+] show detail - NAC domain containing protein 35
  Distance: 0; Region: exon3 (CDS)
- AT2G02450.2 - [+] show detail - NAC domain containing protein 35
  Distance: 0; Region: exon3 (CDS)

CGGTAGAGGA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCTGCA 
GGGGTTAAAT AGCAATTATG TATTTACCTT AAAAAGAATT TGGGAACCTC 
TCTTTAAATT AATGCAGAAG CTCATCTCTT GTCTTTCTGT CTCTGAAACA 
GGCAACCTCA TTCTTGTCAC TCGACGCACG TGGTACCGAT GGATGATCTT 
CTACTCCTGG CCTTTTGTAC ACTCGGCACA ATGATATTTC AGCCTATAAT 
TATACATGAG CACATTGATT AGAGACTTGA TACATATATC AAATTATCAA 
ATATAGACTA ACAATATCTA TGAAAAATAT CATTTATCGA AGATATGGTT 
TTGAAAGAAG ATTCACAAAC TATGTAAAGT TAGCATTAGC AAAAAAAGAG 
TACGTTTAGA AGAAATTTAG ACTACTATCA TATGACGTAA CAATGTATAA 
ATTTATGGTT TCAAATGGTG ACGACATATA AGTCGAAAGA GCCCAAAAAT 
GTATTTCTCT ATCCATTGTC ATTATCCGTA TACATGATAT TTTTTCGGTC 
TACTCCATAA ACCGTTATCC TTCGTATAGA TTTTAAGTGT TCGCATATAG 
ATATGTTGGT ATAATTTATA TATGCCAAAT TATTTCAAAA AATGTTGGGT 
AACTTAAATA GAAGACATGA GTTAATGTGA GGAAGAGCAG GAACATTCAT 
GTGATAAATT GTAAGAAAAA CTAACTATGT CTCTGCAGAA TTAAGGTATA 
TGAATGTCGA GTGTGATACT TGTGTGTTTA TATATGTGTA TGCATCTATC 
TATTAATGTA TTCTACTATA ACATATGGGC CATGTCT

5 prime edge [+] show sequence

Chromosome: 2; Position: 663336 [Map]; Strand: w
- AT2G02480.1 - [+] show detail - AAA-type ATPase family protein
  Distance: 0; Region: exon3 (CDS)

TGTTGGAACT CTTGGATTCC CATTGTCTTC TGACCAGCAG AGACTGTTAA 
GCGAGCTAGA GAGTTGTTGG ACCTTGGAGC TGACCCAATA GTCTTGATGT 
CTCAACTCGC CAGTCTTATT ATGGATATCA TTGCTGGTAC ATACAAGGTC 
GTAGATGAAA AATACAGCAA CGCCTTCTTT GACGGAAGAA ACTGTGAGTT 
CCCAGCAAAG TATTTAAAAT CCATATTGGC CATATGTGCT AAAAAAGTAG 
TTTAGTGAAG CGTTATGATC TGTTAGCTTG TTGAGATCAT TGCCCGTTTC 
ATATT

AT2G02450.1

Model type: Protein coding
Short Description: NAC domain containing protein 35
Computational Description: LONG VEGETATIVE PHASE 1 (LOV1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 4817 Blast hits to 4369 proteins in 130 species: Archae - 0; Bacteria - 5; Metazoa - 115; Fungi - 57; Plants - 2924; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02450.2

Model type: Protein coding
Short Description: NAC domain containing protein 35
Computational Description: NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02480.1

Model type: Protein coding
Short Description: AAA-type ATPase family protein
Curator Summary: STICHEL mutant shows trichomes with fewer than normal branches.
Computational Description: STICHEL (STI); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, ATP binding; INVOLVED IN: trichome differentiation, trichome branching; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 15360 Blast hits to 15082 proteins in 2818 species: Archae - 391; Bacteria - 8894; Metazoa - 533; Fungi - 525; Plants - 301; Viruses - 38; Other Eukaryotes - 4678 (source: NCBI BLink).
Link: InterPro Scan - TAIR