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Mutant Lines
GT15932

GT15932

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT15932

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 75576 [Map]; Strand: w
- AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: -187; Region: promoter
- AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: -198; Region: promoter
- AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: exon1 (5UTR)
- AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: exon1 (5UTR)

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGAT 
CTCTGAGGCT AACTAACAGG AAGGAAGCGG GAGAAGAGCA GCTGCAGAGT 
CGCTCTTGTT CTAGCTGCTG CTGACTTTGG TGGACCAACC AACTTAATAT 
AATGGTTTGG GCCTTAGAAT GGTTTGGGCC TATACCGAGA GGCCCGGCTT 
ACCCAGAAAG AAATGCAGCA ATAGTCAATG CCACTGCCTG GAATTCGTCG 
ATCGAGCGAT AAGAAGAAGA CTGGAATTTT TTTGAGGAGG ACTCTGCTCC 
ATCGCCGCCC GCCCTGTAAC CCACCGGACT CAGTAAACTA GTCTGTAACA 
CAATATCTTC TATTTCAGAT AAGATTTAGC TTGGAGAAGA GCAAGTTCCG 
AAAATGGAGG GGCGTCGTGT ATAGATCCAC CACCCACAGG TTCGTAGATT 
CCATAACCTT GGATTGTGTT TTCTTTTTGC TTTCTCGGCG ACAAATTCCT 
CCGATTTTAG TGAACATGTC TCTGATTTTG GTGTCCTGTG GTGGATCTGC 
CGGAGCAAGT CTTAAACTTG ACTTGGACTG TTTTTACTAG CTAATTCTGG 
GCGCTATTTC GTCTTCCTTG

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 75715 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -326; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -337; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon1 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT15932 - 5-prime edge
```
CTTCTATCAT TACACTTTAA AATCCCTGGG GCCTCCGCCC ACATCTACTC 
TTCCCAGACC TACAACAATG TCGGTAATTA TCTCCTCCTC TACGGA
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 75634 [Map]; Strand: w
- AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: -245; Region: promoter
- AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: -256; Region: promoter
- AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: exon1 (CDS)
- AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: exon1 (CDS)

CTTTCTCCCT GCAGAGATCC TCGTTCCCCG ATAATGGATT TGGGAAAACT 
GATCCAGCTG TCTGCGCTGC TGTGCCCATT TCTTCTATCA TTACACTTTA 
GAATCGCTGG GGCCTCCGCC CACATCTACT CTTCCCAGCC CTTCCACGAT 
GTCGGTAATT CTCTCCTCCT CTACGGTGGC AGCGAGGGCA TCTTCGCCTC 
TTCCCGATCT TTAATCAGGT ATATTCTATG GATTACATTT TCAACTCTTT 
TGATGCTCTC TACTCTACTC TACTCATCCT CCCTCCTCAC TGCAGGTTTG 
AGAACATCAC TCTCTGGAGG ACAATTACCG GTAAGGGCCA CCGCAGCAAT 
GGGTTAGTTC AAGCAGTGAT CTTTGAAGCC TCCGATCGTA ACAATATCGG 
TGGTTCAGCT TACGGAGGCC AAAGATCTAT TTGCTGCACT CCAGATCTGG 
CCAAGCTTCA AGGCTGTAAG CAGGGTGAGA TCATTAGGAT TCCTTCTCCA 
CATGACCCTC AATGGCCTAT CCTCTTACCT GTCCGCTTTA AAGGAAAACG 
CTCGTCTGCT AAGATGGCAG ACACTGAGAT

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR