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Mutant Lines
GT15856

GT15856

CSHL Arabidopsis genetrap mutant lines

Original: GT15856

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15856

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 2855529 [Map]; Strand: c
- AT1G08900.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon18 (CDS)
- AT1G08900.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon18 (CDS)
- AT1G08900.3 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon18 (CDS)
- AT1G08910.1 - [+] show detail - zinc ion binding;zinc ion binding
  Distance: -698; Region: promoter

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAACG 
ATCGTATTCA TATGGACATT GGTGCCTGAG ACGAAAGGCC GAACACTCGA 
AGAGATTCAA ACATCATTAG TCCGACTTTC GTAAAATCTA AGTATGGATT 
ATACGTAATG TTAAGTCTCT TGAATAGTCT TTTTAACCGC TGTCAAAAAG 
AAAAGAAAAG AATAGTCTTT TTAACCGTAT ATTAATGTTT GGTTAAATAA 
GCGTTTTCTC TCACTTTGAT TAAATAGTAA TAATGGCTAT GATTTTACCT 
ATAGGATTTA ATATTTGAAA ACTGTGATTT GTGAGCTCTA ATCTTGATTA 
GAGTGACACA TATTAAAGTG TAAACGTTAA AGTAAGGGAG ATGAGCCGTC 
GCAGGCAGGC TAATGTAGAG AGATTAACGT TCTGTTATGA TTAATTAAAA 
TTATGAATTG TCCAATCATA AATGCCTACA ACAAAAACGA GTGGGAGAAA 
AAGAATCAAA AAGACTACAG TAGAAAGTAG AAGGGGACTT AGTAAAAACT 
ATCAGAATCT GAAGGACCGA GTTGTAAAAT AAAGAAACAA GTAAACTGCC 
AAGTATAAAA GGCGACAAGC TACTCTCAAG CGGCTGTGTT TGTCGTGGGT 
CGGTTTATAA TCATTATCTC CCCCGGAAAA CTTCTCGG

5 prime edge [+] show sequence

Chromosome: 1; Position: 2855452 [Map]; Strand: c
- AT1G08900.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron17 (CDS)
- AT1G08900.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron17 (CDS)
- AT1G08900.3 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron17 (CDS)
- AT1G08910.1 - [+] show detail - zinc ion binding;zinc ion binding
  Distance: -775; Region: promoter

CACCAGAGAA ACTCCAGAAA ATATGAAATA TGTTCCTATA AATCCAACAA 
ACCAAAATTA ACTATATAAA TTATTCGCTT ATGTTTACTA AATAGTTGAG 
CAGTTATATT TGATGTGTGG AATCTTACCG GAAGCGCTCC ACTGTATCAT 
GAAATTAAAA CTATAGATGA TAATCCAATT AAAAAACCAA TTTGACATCG 
TTACAAGGCT ACCGGCGGTG ATTTTCACAT TCACCGGAAA TATCTGCCAA 
ATTTTGAAAA TCAATTATGA AATTTCATAT CAAAAAACTT AATTTATTTG 
TTAAGTTTAG TTTAAAAGAT AAGTAAACAA ATACCTCAGA CATTATAACC 
CATGGTAATC CACCTAGGCC AATGCCAAAG GATGAGACAT AACCCTGGTT 
AACATATATG ACTTGGTTGA TTAGTGCTCT GGTTTTTATA AACCGGTTGG 
TCCATTGGTT GAATTTATTA ATAGACTGAA AGTAAGTTTG GCATTTACGT 
ACCACTAAAC CGACGATTAA CATAACGGAA CATAACTTCT GAAATTCACC 
AT

AT1G08900.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 23143 Blast hits to 22654 proteins in 1781 species: Archae - 437; Bacteria - 7818; Metazoa - 5011; Fungi - 6239; Plants - 2470; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08900.2

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 23143 Blast hits to 22654 proteins in 1781 species: Archae - 437; Bacteria - 7818; Metazoa - 5011; Fungi - 6239; Plants - 2470; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08900.3

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 22743 Blast hits to 22256 proteins in 1748 species: Archae - 444; Bacteria - 7522; Metazoa - 5012; Fungi - 6093; Plants - 2466; Viruses - 0; Other Eukaryotes - 1206 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08910.1

Model type: Protein coding
Short Description: zinc ion binding;zinc ion binding
Computational Description: embryo defective 3001 (EMB3001); FUNCTIONS IN: zinc ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, MIZ-type (InterPro:IPR004181); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 1002 Blast hits to 979 proteins in 199 species: Archae - 0; Bacteria - 25; Metazoa - 593; Fungi - 182; Plants - 101; Viruses - 6; Other Eukaryotes - 95 (source: NCBI BLink).
Link: InterPro Scan - TAIR