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GT15807

CSHL Arabidopsis genetrap mutant lines

Original: GT15807

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15807

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 19569 [Map]; Strand: c
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT15807 - 3-prime edge 
    AGCTGCTGCT CGCGCTCCTA ATATCCATGC CAACATGATG CCAAACCCAT 
    TTTTGCCCAT GAATTGTCCA TCGTGGGATG CTTCTTCCAA TGACTCTAGA 
    TTTCAGTCTC CTCTCATCCC CGATCCTATG TCTGCCTTTC TTGCATGCTC 
    TACTCAGGTT GACCCTTTTT CTATATATAG ATATACAACT TGGGTCTAAA 
    CAATGCTTCA GCACCATTTA TATTTTTATA TATTTGGAAT TG

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR