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GT15800

CSHL Arabidopsis genetrap mutant lines

Original: GT15800

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15800

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58452 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15800 - 3-prime edge
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGAG 
    AGCGACACGT GTCTAGCTCA GGGGATATTG GCGCGGCTCA ATCAACAGCT
    CTCTTCTCCC GTCGGGAAGC CATTAGAAAG AGCAGCTTTT TACTTCAAAG
    AAGCTCTCAA TAATCTCCTT CACAACGTCT CCCAAACCCT AAACCCTTAT
    TCCCTCATCT TCAAGATCGC TGCTTACAAA TCCTTCTCAG AGATCTCTCC
    CGTTCTTCAG NTCGCCAACT TTACCTCCAA CCAAGCCCTC TTAGAGTCCT
    TCCATGGCTT CCACCGTCTC CACATCATCG ACTTCGATAT CGGCTACGGT
    GGCCAATGGG CTTCCCTCAT GCAAGAGCTT GTTCTCCGCG ACAACGCCGC
    TCCTCTCTCC CTCAAGATCA CCGTTTTCGC TTCTCCGGCG AACCACGACC
    AGCTCGAACT TGGCTTCACT CAAGACAACC TCAAGCACTT CGCCTCTGAG
    ATCAACATCT CCCTTGACAT CCAAGTTTTG AGCTTAGACC TCCTCGGCTC
    CATCTCGTGG CCTAACTCGT CGGAGAAAGA AGCTGTCGCC GTTAACATCT
    CCGCCGCGTC CTTCTCGCAC CTCCCTTTGG TCCTCCGTTT CGTGAAGCAT
    CTATCTCCGA CGATCATCGT CTGCTCCGAC AGAGGATGCG AGAGGACGGA
    TCTGCCCTTC TCTCAACAGC TCGCCACTCG C

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR