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GT15786

CSHL Arabidopsis genetrap mutant lines

Original: GT15786

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15786

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58487 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15786 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGATAA 
    CAGAGCAGCT GGTTAAGGCA GCAGAGGTCA TAGAGAGCGA CACGTGTCTA 
    GCTCAGGGGA TATTGGCGCG GCTCAATCAA CAGCTCTCTT CTCCCGTCGG 
    GAAGCCATTA GAAAGAGCAG CTTTTTACTT CAAAGAAGCT CTCAATAATC 
    TCCTTCACAA CGTCTCCCAA ACCCTAAACC CTTATTCCCT CATCTTCAAG 
    ATCGCTGCTT ACAAATCCTT CTCAGAGATC TCTCCCGTTC TTCAGTTCGC 
    CAACTTTACC TCCAACCAAG CCCTCTTAGA GTCCTTCCAT GGCTTCCACC 
    GTCTCCACAT CATCGACTTC GATATCGGCT ACGGTGGCCA ATGGGCTTCC 
    CTCATGCAAG AGCTTGTTCT CCGCGACAAC GCCGCTCCTC TCTCCCTCAA 
    GATCACCGTT TTCGCTTCTC CGGCGAACCA CGACCAGCTC GAACTTGGCT 
    TCACTCAAGA CAACCTCAAG CACTTCGCCT CTGAGATCAA CATCTCCCTT 
    GACATCCAAG TTTTGAGCTT AGACCTCCTC GGCTCCATCT CGTGGCCTAA 
    CTCGTCGGAG AAAGAAGCTG TCGCCGTTAA CATCTCCGCC GCGTCCTTCT 
    CGCACCTCCC TTTGGTCCTC CGTTTCGTGG AGCATCTATC TCCGACGATC 
    ATCGTCTGCT CCGACAGAGG ATGCGAGAGG ACGGATCTGC CCTTCTCTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58547 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15786 - 5-prime edge 
    CTTTCTCCCT GCTGTTATCC CCACGGGACC AGGGTTGAGC CGCTTTGCCG 
    GCGGAGGTGT ATGGTGGTGG TGGCCGTAGA AGATAGCCGC AGGATTCTGT 
    GTGTAGTGGG TTTGACTTTG GTTGATCAGA AGACCGGAAA CATGTGACGG 
    CGGAACAGAG TGGTAGTCTA AACCGAAGCC GGTGTCGACG ACTCCGAAAC 
    CGGGTGATGA GTAGTCAGAG TCGTGGAAGG TGGGAGATGT TTGGAGAATG 
    CTGTTGAGTT CAAGAGAGGG ATCTGTGGAA TCTCCCATGA TGAGTCCGAG 
    AATGCTCTGT TCGTGGTCAT GAGGAACTTG CTCCTCCCAA TCACCCAACC 
    CAATGGCTCC GCATTGCTCA TCGGTGGTGG CGTCGCCGCC GCCTCCGACG 
    GCGCTGTTTC CGCCGTGAGA GGAAGACACC GTGGAGGAAG AGGTTGGGCT 
    TATGAGGGAG TCCAGAACAG AGGTAGGCTC CGCCGCGGGA ACTTCTTCCT 
    CTTCTTCTTC GCCGCCTCTT GCTTTGCGGT GGCTCAAAAG CGGAGACGAC 
    GGTGGTTGGG GGAAGGAAGA CGAGAAAGAA GAGAAACAAG AAATCCCCTT 
    CCCTTGAAAC TCTTCAAAGG GTAAGGGCAT TGCAGACGAT AAAAAATAGT 
    GTATTTGTCT TCTTGAAGCT CTTCTTCTTC TTCTTCTTCG TTGTTGTGAT 
    GTGGTGTGGT GAGGTATATT GGATGCGTGC AAGATATTAA AGTGGCAAAG 
    TGGGCTTCCT CCTTT

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR