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GT15700

CSHL Arabidopsis genetrap mutant lines

Original: GT15700

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15700

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11190955 [Map]; Strand: w
      • AT5G29560.1 - [+] show detail - caleosin-related family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT15700 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
    ACGTTAACAT TTCTCTATGA TGATATTTAT TGAATATGTG GTTATAAATA 
    TCAAAATTTT CAGGTACATT CCTGCAAATC TTGAGAACAT GTTTAGTAAG 
    TATGCCCGTA CAGTGCCTGA CAAGCTAACT CTGTTACGAG CTGTGGCAAA 
    TGACGGAAGC TAACCGCAAC GCATTCGATT TCTTTGGCTG GTCAATCCCC 
    TCTTTGTCTC TCTTTCGTAT GGCCTTTTTT TGTCTCTCTC TTAATGGTGT 
    GAAAATAAAA ACAGGGCAGC GAGTAAAATG GAGTGGGGAG TACTCTACTT 
    CCTTGCCAAA GACGAGAATG GTCACTTATC GAAAGAAGCG GTCAGGAGAT 
    GCTTTGACGG GAGCTTGTTC GACTACTGCG CCAAGGCGAG AGCTTCGACT 
    AAAAAGACTG AATGATGGAT GACACACGTA CGGGTTTCTT ACTCTCTATG 
    CAGTTAAATG TCTTAAGTAA CCTTTATCGA GTCTCTTAAT CAAAGCACGC 
    ATTAGATCAT ATAAATTCAG ATCGTAATGT TTTGCTTCTT AAGTTTCTCA 
    TCTTGTTATA TTGTTCTTTT AGTTGCTAAA TTTAGATGAC TCCTTTGCTT 
    GAGGGATATC ATACAAGATG CTGAATGTGT

AT5G29560.1

Model type
Protein coding
Short Description
caleosin-related family protein
Computational Description
caleosin-related family protein; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS THALIANA PEROXYGENASE 2 (TAIR:AT5G55240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR