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GT15677

CSHL Arabidopsis genetrap mutant lines

Original: GT15677

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15677

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 111006 [Map]; Strand: w
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -2395; Region: intergenic
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: -3969; Region: intergenic
    Flanking Genome Sequence: GT15677 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    GCAAAGGAAC ACGATAAGAT GCATCCAAAA GAGGTTGTTT TTGACAAAGA 
    TGGGAGATTG GAAATTCCAA AAGTTGACAT TGTTCCGCAA CATGTTTTTG 
    TTTGATCAAT AATTAGTAAA CTATAAAACA TGTACGAGAC ATACATAATC 
    TTGGATACAT CAACAGGTAA TGTTGTTAGA GAAGGATTGT TCTTATGAGA 
    ACCGAGAACG TCATTTAACT TTGGTGAGTA CGAAGGGGTT TGTTCGACCA 
    TTAGGATGAA TATAATCAAC CTTCTCGTTT GATCGTGATT TGGTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 111059 [Map]; Strand: w
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -2448; Region: intergenic
      • AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
        Distance: -3916; Region: intergenic
    Flanking Genome Sequence: GT15677 - 5-prime edge 
    CCTACTTTCT CCCTGCGTAT GAAATAATTA ATGAAAACGT TAGCTTTTGA 
    AAGGGACTTT ACTTACTTTA TCTCAATTTA TGCTTATCAA TTTTTATATC 
    TATTTTTTTT TAAATGTCGT AATCTGCTAC ACACAACGAA TTATATAATC 
    GGTTATTGTC ATAGCTATAG AGTTGACCCG GTGGAAAATA TAGAAAATAT 
    GAAAATTAGT GTAAATTAAA GTTTGACTCA AGTCTAAAAC CTTTTTTTTT 
    TTAAAAAAAA AAGGGGGGGG AAAAAAAAAC CCCCCCCCAT TAAATCGGGA 
    AGGGAAGGGC CCCCCCCCAA AATTAAACTT TAATTTTTTC CAAATTTAAA 
    GGGGGATTTT TTTTTAAAAA AAAAAATTTT GGTTTTGCCC CTTGGGGGGG 
    TTCCAAAAAG GGGTTTACTT TAAAACCTAA AAAAAGGGGA AAGTTTTCCT 
    TTTTTTTTGG GGAAAAAAAA GGGTTTTCCC CCTTTTTTCC CCTTTTAAAA 
    GGAAACTTTT TTTTCCCGAT TTCCCGGGGA CCAAAATCCC TTTTTTTTTT 
    TTTAAAAAAG GGGAATTTTT AAGGGTGGGG CTGGGAAAGG CCCCAACCAA 
    AAAGGAAAGG TTTTTGAAAT AATTGAAAAA ATCCTTTCCC CCCGGAAAAT 
    TTTTTTTTGG ATAAAAAAAC TAACCCCCCC CCCCAACCCC CTTTTTTTGA 
    T

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01190.1

Model type
Protein coding
Short Description
Octicosapeptide/Phox/Bem1p family protein
Computational Description
Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
Link
InterPro Scan - TAIR