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GT15432

CSHL Arabidopsis genetrap mutant lines

Original: GT15432

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15432

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59359 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -73; Region: promoter
    Flanking Genome Sequence: GT15432 - 3-prime edge
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    CTTAACTATG TCTTCTATTA CAACCCCACT CTTACATCAC GCGCGTGGCT
    TGCAAAGTTG CAAACTCCTT TCAGTGACAT GAACATGATG GTAAACAAAA
    ATACTAAATG TTATGATATA CTTTTAAATA TTGTATTTGT CTTCTTGAAT
    TACTAGAAAC TATTTAAAAA AAAAACATTT TTCCCATATT TTTGATGTTG
    TACTGTATAT TTAGATGTCA TAATACTTGC CCAAAAAAAA AAAAAGGGGG
    GCAAAAAAAT TGGGGAAGGT TTTTTTTTTT TAAAAAATTT TTTTCAAAAA
    AAAAAATTTG GGGGTAAAAA AAAAAATTGG GGAAAAGGTT TTTTTTTTTT
    TTACCCAAAG GGGGGGGGGG TTTTTTCCTT TTGGGGGAAC TTTCCCCCCA
    AAAATTTTTT TTGGGGGGGG AAAAACTTTT TGGAACCTTT TTTAAAAAAA
    ACCCCCCCAA AACCCCCCCC CCTTTGGGGA AAAAAAACCC CAATTGGGGG
    GGGGAAAAAA AAAGGGGGGC CCCCTTTTTT TTTTTTTTTT TCCCCCCGCC
    CCCTCTTTTT TTTTTTTCCC CCCCCGGGGG AAAAAAAAAA ACTTTTTTTT
    TTGGGGGCCC CCACAAAAAA TCTTTTTTTT TTTTTTTTTT TTTTAAAAAA
    AAAAGAAAAA
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59303 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -17; Region: promoter
    Flanking Genome Sequence: GT15432 - 5-prime edge
    ACTTTCTCCC TGGTTAAGAT TAGAAAGCAA AGATTAACAA AATGTTGTGT 
    AAGAGAAGCT GATGAATTGT TTAATCAGCT AAGTTAATGA CAAAGGCAAA
    ATGATAGGAA ACGGAAATAA GAGAGAAAAA GAAAGGAGGA AGCCCACTTT
    GCCACTTTAA TATCTTGCAC GCATCCAATA TACCTCACCA CACCACATCA
    CAACAACGAA GAAGAAGAAG AAGAAGAGCT TCAAGAAGAC AAATACACTA
    TTTTTTATCG TCTGCAATGC CCTTACCCTT TGAAGAGTTT CAAGGGAAGG
    GGATTTCTTG TTTCTCTTCT TTCTCGTCTT CCTTCCCCCA ACCACCGTCG
    TCTCCGCTTT TGAGCCACCG CAAAGCAAGA GGCGGCGAAG AAGAAGAGGA
    AGAAGTTCCC GCGGCGGAGC CTACCTCTGT TCTGGACTCC CTCATAAGCC
    CAACCTCTTC CTCCACGGTG TCTTCCTCTC ACGGCGGAAA CAGCGCCGTC
    GGAGGCGGCG GCGACGCCAC CACCGATGAG CAATGCGGAG CCATTGGGTT
    GGGTGATTGG GAGGAGCAAG TTCCTCATGA CCACGAACAG AGCATTCTCG
    GACTCATCAT GGGAGATTCC ACAGATCCCT CTCTTGAACT CAACAGCATT
    CTCCAAACAT CTCCCACCTT CCACGACTCT GACTACTCAT CACCCGGTTT
    CGGAGTCGTC GACACCGGCT TCGGTTTAGA CTACCACTCT GTTCCGCCGT
    CACATGTTTC CGGTCTTCTG ATCAACCAAA GTCAAACCCA CTACACACAG
    AATCCTGCGG CTATCTTCTA CGGCCACCA

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR