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GT15364

CSHL Arabidopsis genetrap mutant lines

Original: GT15364

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15364

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26335488 [Map]; Strand: w
      • AT1G69920.1 - [+] show detail - glutathione S-transferase TAU 12
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15364 - 3-prime edge 
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATT 
    ACAAATCAGA AAAAGAAAAA AACCACGATG GCTCACAATG GTTCGAATAC 
    TACTGTGAAG CTGATAGGGA CATGGGCAAG CCCATTCGCT ATAAGGGCTC 
    AAGTGGCTCT ACACCTCAAG TCAGAAGAGC ACGAGTATGT CGAAGAAACT 
    GATGTTCTGA AAGCAAAGAG CGATCTCCTT ATTAAATCCA ACCCTATACA 
    CAAGAGAGTC CCTGTCCTCA TCCATGGTGA TGTATCAATC TGTGAATCTC 
    TCAACATCGC CCAATACGTC GATGAATCTT GGCCGTCTGA TCTTTCCATC 
    CTCCCAACAC TTCCCTCGGA ACGTGCCTTT GCCCGTTTTT GGGCTCACTT 
    CGATGACGGA CAGGTAACAA AAAACTTAGA TATATTATTT TTAGTTAGTG 
    AATTTGTTTT TAGCAATGTT GAATTTTGGC CAATGAAGAA TCCTGATATC 
    AGACCCGAAA CAATTATGTT AATATCTGTT AAGTTTTAAC TTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 59708 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -422; Region: promoter
    Flanking Genome Sequence: GT15364 - 5-prime edge 
    ATGAGTCTGC AACAACAAAA CAGATCACAG TTATTCTCAT CGGCTTCTCT 
    TACACAACAT GTTGTTAATC TTTGCTTTAA ACTTAACCAT GTCTTCTATT 
    CTAACCCCAC TCTTACATCA CGCGCGTGGC TTGCAATTGC AAACACCTTT 
    CAGTAACATG AACATGATGG TAAACAAAAA TACTAAATGT TATTTTGTTT 
    TGTTGTTCGC GTTTATGAAT TTTACGTTCT ACAAATAGCA CGAGAAGTTC 
    TTGTAAACAT TGCTTTGATG AGTTGTTTCT CGTTCCAAAA TATTATGCAA 
    ATTGGGGAAT TAAGTAACAG AGCTTAATCG TTATCCTAAT GTTATAAACT 
    TATCATCTGA GTCATTTCAC GCGAAACATT ATCTGAACCG GACTGGTTTA 
    AAAATAGATG AGAATTTTGA AAATGATTAT TGAACGGCTA AGATACTGTT 
    CATATACTTT CTTTGTTACA TCTTTTCTTT TTAAGAAAAA AATGATTGAA 
    GATCTGTGAA TGATGTTTCT TCTGTGACAA GTTAAACGCA CGAGAGATTG 
    AGAAAGAACG TGTGGTAGTC CTCTATTGAG CAGACAATGG AAGTCACCTA 
    TCACCATATA TATATATATA CACATGGACA TATCTACCAA TGGAAAACCC 
    TATAATATAT AAATGAATAA AGCACT

AT1G69920.1

Model type
Protein coding
Short Description
glutathione S-transferase TAU 12
Curator Summary
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase TAU 12 (GSTU12); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336), Glutathione S-transferase, N-terminal (InterPro:IPR004045); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 13 (TAIR:AT1G27130.1); Has 3943 Blast hits to 3928 proteins in 654 species: Archae - 0; Bacteria - 1408; Metazoa - 251; Fungi - 102; Plants - 1945; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR