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GT15250

CSHL Arabidopsis genetrap mutant lines

Original: GT15250

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15250

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9245367 [Map]; Strand: w
      • AT5G26340.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15250 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACATGCCT 
    ACGTCTTATA TAGTCGCAAA CAAAATTTTC TCCGGCATTG ACTTTTAATG
    CGTTATGATG ATCTGTCACC TGTAATTAAT GGGCTTACGT GTAGGCCCAT
    AACGGAGTTA AAAACTGGCC CACTAAATAA ATTTTGAAAT GTTCGCAGGA
    TTAAAGGAGG TTGGGGATGG AGGTTATCGT TAGGTTTGGC GGGAATTCCC
    GCGCTTCTTC TAACGGTCGG AGCTTTATTG GTGACAGAGA CACCAAACAG
    TTTAGTCGAA AGAGGTCGTC TCGATGAAGG TAAAGCTGTT CTTCGTCGTA
    TTCGAGGGAC CGATAATGTT GAACCAGAGT TCGCTGATCT CCTTGAAGCT
    AGTCGACTTG CTAAAGAAGT TAAACACCCT TTTAGAAACC TTCTTCAACG
    TAGAAACCGT CCTCAGCTCG TCATCGCCGT CGCTTTACAG GTTAGTACTA
    CCACTTCTCT GTTCTCTCGT AATTGGTAAT CGGAAAAGTT TATCTCCGAT
    TTGGAGAGTT TGACTGAAGT GATTTTGTTT TTCGTTTAGG ATCTAGAAAC
    CCTAAAATTT GATTCCATTG TGGTCATTTT AGGAGCAATA ACCCTAATTG
    TTTGTCAAGT TTCCATAATT TTAATTCCAT TGTGTTCA

AT5G26340.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Curator Summary
Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.
Computational Description
MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR