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GT15013

CSHL Arabidopsis genetrap mutant lines

Original: GT15013

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15013

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11517025 [Map]; Strand: w
      • AT4G21670.1 - [+] show detail - C-terminal domain phosphatase-like 1
        Distance: 0; Region: exon17 (3UTR)
    Flanking Genome Sequence: GT15013 - 3-prime edge
    TTGTTGTTAC ATCAATACAA GAGAGGCAAC TCTCGCTGTC TTGATCATCA 
    TTTGGCGAAG AAAGGAACTT GACAAAGAAT TCGTCTTGGG AGCTGTTTTT
    ACCAAGAGAA TGGAATTAAT GTAGAATGTG GTTCGTTCTT CACATGGTTT
    TATTTTTAAG AGGATCTTCC CGAAGAAGGC ATCCGTTGCA GAGACCGTTG
    AAA

AT4G21670.1

Model type
Protein coding
Short Description
C-terminal domain phosphatase-like 1
Curator Summary
encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl.
Computational Description
C-terminal domain phosphatase-like 1 (CPL1); FUNCTIONS IN: double-stranded RNA binding, phosphatase activity, nucleotide phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway, negative regulation of transcription, response to abiotic stimulus; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2 (TAIR:AT5G01270.2); Has 330 Blast hits to 317 proteins in 105 species: Archae - 0; Bacteria - 31; Metazoa - 57; Fungi - 81; Plants - 112; Viruses - 1; Other Eukaryotes - 48 (source: NCBI BLink).
Link
InterPro Scan - TAIR