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GT15000

CSHL Arabidopsis genetrap mutant lines

Original: GT15000

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15000

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18430 [Map]; Strand: w
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15000 - 5-prime edge 
    ATTTCCATCC TACTTTCTCC CTGCCGGAGT GGAGCGGCGG CGGGAGTCAG 
    CGGCTGACCA TGGACACTTA CGACGTAGGT TTCACCTCAA CATCAATGGG 
    CTCGCACGAT AACACAATCG ACGATCATGA CTCCGTCTGC CACAGCCGCC 
    CACAGGCAAG TCATCATATA TATTAACTTG TTCTAGTTAA TGATGTCTCT 
    AGCTTTATAA GTAAATGATA ATAATTAAGG AAAAACGATA GATGGAGGAC 
    GAAGAAGAGA AGAAAGCCGG AGGAAAATCA TCAGTTTCAA CCAAGAGAAG 
    CAGAGCTGCT GCTATTCATA ACCAATCCGA ACGTGTAATG ATTCACTCAA 
    CCATTATTTT ATTTTTCAAA AAAAGTTTC

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR