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GT14977

CSHL Arabidopsis genetrap mutant lines

Original: GT14977

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14977

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11109885 [Map]; Strand: w
      • AT4G20720.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 1832; Region: intergenic
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 1878; Region: intergenic
    Flanking Genome Sequence: GT14977 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACAAAGAC TTCCTATTTT CAAAGGAGAA 
    AACTTCTTTT TCTTCGAATT AGGAAGTCGG CTAGACGGTC TCCCTACTTC 
    GGGCTAAAGT CGGCAAATGA CCTCCTTATT TTGGCCCATT AACAGGCTAA 
    ACCGGGATAC CCCGGTTTGA TTGAAATCTC AGTCTAATTC GTAGTTCCTC 
    TGGTTTAAGC CGGTATTGTC GGAGGTGCTA ATTCCGGCAC CAACACACAT 
    GTTTGATTTG TGTCAATCAG AAATAAATAT ATAAACAAAT ATAAGTTAAA 
    GACGAAGTCT GTTACGCATG GTAAAGGCAA AATAGAGCGT TTTTGTTGCT 
    TCAAAGTACG AACTTTAGAT GTCAATATCA AAGAGTATGA CATAAGTAAC 
    TTATATCTTC TCTCTTCTAT ATGTGAAAAT GAACAACTAT GTATTTCAAT 
    CATGCATGTT TCTGCAATTT AGTAGATGAA TCTTTTGTTA TATTTCGGTT 
    AGTATAAATG GCCACTACTA CTGGTTTATT GATTTGCAGA CTTATGAAAC 
    AATTAAGGTC GACAATCAAC ATAATTAATA GAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11109964 [Map]; Strand: w
      • AT4G20720.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 1911; Region: intergenic
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 1799; Region: intergenic
    Flanking Genome Sequence: GT14977 - 5-prime edge 
    TCCTACTTTC TCTCTGTCTT TAGAGATAAA GGAAATTAGA AGATTCAATC 
    CTCGAAGAAA TAGAAGTTTA ACAAATCTTT TAACCATCTT AATAGTGTAT 
    AAATAGAGGG GTTTGTCCTC TATTCTAAGG ATCCGAAATT TAATACTAAA 
    AACCCTAGTT TTCTTCATTG TTCTTGGGCA AAACCCTAAC TTTGTCTCTA 
    AGCAACATTG TTCTTCTTTT CATTGAATCT TTGGTCACTA AATAGCGAGA 
    GAGTTAAGTA AATTTGTTTA CCCCCTTTAA ACAAATTTAT TGTGTGATTT 
    TCAGAATCAA CAATTGGCGC GCCAGGTAGG GGGACACAAA CAACTCTCTT 
    CGCATATTAC TCATCTAAGT TTTCGGTGAA CGCTCATCAA GCCAAGATAA 
    TCCAATCCGT TTATTTGCTC GGCGATTTCC CGTCAGGTTC CAATGAACCG 
    GGTGACGTGT AACGTGTTCC CGGATTGCCC CGGAGATCAG CTTTCCAGGG 
    AGTCTAACCA TGGTTCAATC GGATATCTAT TCTGAGAGTT ATCACCGTAT 
    TTGTAAAGCC GATGCTGTCT GTTTCAACAC AGATCCGTCT GAATAGACCA 
    GTCAACCTGA GGACCGATTT CCCGATATGT CGCAACGACT CTTGCATCAA 
    ATAATATGTT CACGGATTGC CCCGGTTGTT AGCTTTCCAG GGAATCTAAC 
    TACCCTTCGA TCCGATATCT CATCCGAGAA TTATCTCCAT GTTTCTGCAG 
    AGGATGCAAT CTCGTTTGAC ATAGAATCCT TTCTTAAAAG ACTAGTCATC 
    TTAGGGATCA A

AT4G20720.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT1G05090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR