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GT14744

CSHL Arabidopsis genetrap mutant lines

Original: GT14744

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14744

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 660821 [Map]; Strand: c
      • AT2G02480.1 - [+] show detail - AAA-type ATPase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT14744 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTCCGG CGATGTATTA 
    TAATCCCTAG ACCTTAGTTC CGGCGAACTC TCGAAGAACA AACAAGTATA 
    TATTATTATT TTCTTCTCAC TGGACCAGGC TGTTTCCACG ATTCCTTCGT 
    TTTATCTTGG ATCTACAGTT TTACATTCTT CTGATTTTCT TCACTTTCAT 
    TGTTTCCACT GCGTTGTTCT GATTAGGTAT TGCACAGGTT TTGAAATGTC 
    AGTGAAAACG CGAAGCTGAG AGAGGAGAAG GAAGAAATCG AAGGCAGCTG 
    ATTCAAATTT TGGAAGAAGA AAAAATGTCA GGTTCGAGAG TTTCGGATCT 
    GAGTAAATTG CATCTGAAGA AGGAGCTGAC TCAAATCAGA AAAGCTGGCC 
    GTGTTTTACG CGATCCAGGT ACTACTTCCT CCTGGAAATC TCCTCTCGAT 
    TCGTCAAGAT CCGTCGCGCT TTTGGAGACT CCGGCGAGCA GAAACGGTGG 
    CAGTTCGAGT CAGTTTCCGA TTC

AT2G02480.1

Model type
Protein coding
Short Description
AAA-type ATPase family protein
Curator Summary
STICHEL mutant shows trichomes with fewer than normal branches.
Computational Description
STICHEL (STI); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, ATP binding; INVOLVED IN: trichome differentiation, trichome branching; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 15360 Blast hits to 15082 proteins in 2818 species: Archae - 391; Bacteria - 8894; Metazoa - 533; Fungi - 525; Plants - 301; Viruses - 38; Other Eukaryotes - 4678 (source: NCBI BLink).
Link
InterPro Scan - TAIR