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GT14575

CSHL Arabidopsis genetrap mutant lines

Original: GT14575

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14575

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19471213 [Map]; Strand: w
      • AT2G47440.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14575 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA TCGTTTTCAT CCCTACTCCG 
    ATCAAGCCGT AATAATCGAC ATTCCCAGTT TCTCCGTTTG CGATTTTCTG 
    CTTAAGTTTC TGCGTTTTCG TTGTCAAAAC GCACAATTTC CCAGGAATCT 
    CTCTGTATTT CACGTTGTGC CGCTTCCACA CCGGACCCGG AAGCTTCCGA 
    TCGCGTAAAA TGGTGTTGTA GAGAAGCTTC AAGTGTTCTA GATCGTGAAG 
    CGAATCTGGA AAACACCTGA CCGTTTCTAG AAGCGCGGCT CTGGTTTCTA 
    ACGCCTGGAT ACACGAGGGT TCAAGAGCTA GGGTTTTATT GCAATCGGCG 
    ATCGCTTCCG CGATTCTACC GGCGGATCTA TAAGCGGCGG CTCGATGCAT 
    GTAGCATTCG GCGAGGAATC CTTGAGGCGC AGGGCGACGG CCATCGACGA 
    TCTTGGAGAA GTGACGGATC GACTCGGAGA ACAGTCCAGC GTCGAGAGCG 
    GCGATTGCAG CGGCGCGACG ACGGAGAAGA AGCTTGATGT GAGCGAGGAG 
    ATGGGTGAAG TTCTCGCTCT CGGGTGGTGG AGAAGAAGCA GAGGAGGATT 
    CGGAGAGGAG AAGGAAGCTA TCGTCGGACC AGCAAATACT CCGGCGACGG 
    AACTCGGCGG AGGCGAGGCG TTTACCGGTT TGTAGGAGAA CCATGGCATC 
    CTCCATTAGT CCTAGATGGC AACAAGCTTG ACCCAACACC ACATACCTGA 
    AACAGCGTTT AAAAATCAAC GATT

AT2G47440.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G62570.1); Has 357 Blast hits to 345 proteins in 102 species: Archae - 0; Bacteria - 6; Metazoa - 79; Fungi - 59; Plants - 180; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Link
InterPro Scan - TAIR