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Mutant Lines
GT14533

GT14533

CSHL Arabidopsis genetrap mutant lines

Original: GT14533

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14533

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 6774356 [Map]; Strand: w
  - AT2G15530.3 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: exon4 (CDS)
  - AT2G15530.2 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: exon3 (CDS)
  - AT2G15530.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: exon3 (CDS)
  - AT2G15530.4 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: exon4 (CDS)
Flanking Genome Sequence: GT14533 - 3-prime edge
```
GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGCCAAAC 
CTCCACCAGG TATGATCTTG AGCAGCATGA GAACTCGAAC TTGCATAAGT 
TGGTCGTCCT GAAGGTGTAC TATTGTTTGG AAATCCAGTG TCTGCTGGAT 
TCAACATGGT ATTCAAAGAC GTCTCTGTGC AATAAATCGA TTCACCATCT 
ACTTGATTCT CCTTCACTCG A
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 7514116 [Map]; Strand: c
- AT1G21460.1 - [+] show detail - Nodulin MtN3 family protein
  Distance: -755; Region: promoter

TTTCTCCCTG CTAAAAGATA TCCTGCGGCT GTGGTTCAAC GGTATAGAAT 
AACTGAAATT TAGTGAAACT TATTGGTGCC CTTAAATAAA CTTGACAATT 
TGTTAGGTTT GGTTTCGCTT ATGTAACCAG AAACTTCCTA AACTGTCAAA 
TTTTATCTAG AATCTCTATT AAAGAGGGCA ACGAAAAAAA AAAAGTAACC 
CTCCTGGGAA AAAATAAACC CCTACCCCCG GCCCCCCAAA AAATAAAGGC 
CCGGGCCCCG AGTCACTTTT AAACGCCAAG CCCAAAAAAC CCGGGCTGGT 
TCAAAGCTCC TTTTAGTTTC NACCAAAAAA CAAAAGAAAA AAAAAAATGG 
CCCTTTTTAG GGGTTTATTT CATTTTAAAG AATTTAACCA TTTCCCTTTA 
ACTTTCTACA AAAAAAACGC CAACCCAAAA AGCCGGG

AT1G21460.1

Model type: Protein coding
Short Description: Nodulin MtN3 family protein
Computational Description: Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G53190.1); Has 988 Blast hits to 930 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 221; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G15530.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 9020 Blast hits to 8257 proteins in 301 species: Archae - 0; Bacteria - 55; Metazoa - 2556; Fungi - 687; Plants - 3907; Viruses - 28; Other Eukaryotes - 1787 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G15530.2

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G15530.3

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G15530.4

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1).
Link: InterPro Scan - TAIR