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GT14453

CSHL Arabidopsis genetrap mutant lines

Original: GT14453

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14453

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 128608 [Map]; Strand: c
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: intron2 (CDS)
      • AT4G00300.2 - [+] show detail - fringe-related protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT14453 - 3-prime edge 
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CTCTCAACAT GTCAATTTTC ATTACATTTT CTTGTCTGAT CAAATTCGAC 
    GACTGCAAAA ATTTGTGCTA ATCTTTCCAC GACAATGGCG ATCCTCTACA 
    CAAGGATCGT ATTCCTTCTC TTCGTCTTCC TTGTATCTTC TTCCTCGACT 
    CGACCACTTT CTCTCCTGTC GACGAGTACC TCGTCAACTG CGGCTCCGAC 
    GTTGACTCCA CCGTCGATAA CCGCCGCTTC GTCGGCGACG CATCGTCATC 
    AAACGTCCAA TTCTTCTCCT CTGAAGGATC AATCGCTCTC AAAGGAGAAA 
    ATCTACCTCA GAACGTTCCC CAAATCTACA GAACCGCTAG GATATTCGCA 
    CAACAAGCGA AATACAAGTT CAATGTCCAC GAGAAAGGGA CTCATATGGT 
    AC

AT4G00300.1

Model type
Protein coding
Short Description
fringe-related protein
Computational Description
fringe-related protein; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G01570.1); Has 958 Blast hits to 946 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 151; Plants - 707; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00300.2

Model type
Protein coding
Short Description
fringe-related protein
Computational Description
fringe-related protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24010.1).
Link
InterPro Scan - TAIR