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GT14406

CSHL Arabidopsis genetrap mutant lines

Original: GT14406

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14406

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3374594 [Map]; Strand: w
      • AT5G10690.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing pro...
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: GT14406 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATTGGC 
    ATTCCACCAT CTCCAAGAGG AGTCCCTCAG ATCGAAGTGA CATTTGACAT 
    TGATGCCAAT GGCATTGTCA CTGTTTCCGC CAAGGACAAG ACGACTGGTA 
    AAGTACAACA GATCACAATC CGATCCTCTG AGTGTTGCGC CTTCCAAGAC 
    GAGCACCATC AATTCCAAAT GAGTTGCTAC TGATACAGAT TTAGTTCTTT 
    CAATATATTC ACTTTTGTCA GAAAGAAAAT GAACAAGAAA CAAAACCTTG 
    TTCCCTAACC TTGTTCTTCT TCGAGTTCTC TTGCAGCCTA TGCTGTTGGA 
    GATTCCTTCT TCCCTTGCAC CCCTTCCTTC TTTGTTCCTT CCTCTGGTAA 
    TTCTTCTATT TGAGCCTTTG TTTCGGCTGT TTCTTCTTTC ACTCTGCTGC 
    TTTCGCTCTC TTCCTCTTTA ACTTCTGCTT CTTCCTGTTC CTCTTGTTTA 
    CTTTTTTCGA AATTCACAGC TTCATTCATA TCTGTAGTAG TAGCAACTGT 
    CTCGCTATTT TCCTCATCAT CAACTTTCTT GCTATCAAAC TCCTCATAGA 
    TCTCAATCTT CTTGCTATCG ACCAACACTT CTCGTCTCTT CTGCCTAAAC 
    CCGCGGAACA AATCACTCGT CT

AT5G10690.1

Model type
Protein coding
Short Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Computational Description
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR